Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq1 174 4e-38
seq2 170 5e-37
>seq1
Length=4858313
Score = 174 bits (192), Expect = 4e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || || || ||||| || |||||||||||||| || || |||
Sbjct 3612720 CAGATTTTCGTGAAGACCCTTACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCTGAC 3612661
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| |||||||| || || ||||| |||||||||||
Sbjct 3612660 ACTATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCAGCAG 3612601
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||||||||| || ||||| || || ||| | || || |||| || ||| ||
Sbjct 3612600 CGACTTATCTTCGCCGGTAAGCAGCTTGAGGACGGACGAACCCTCTCCGACTACAACATC 3612541
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || ||||| || || || ||||| | ||||| ||
Sbjct 3612540 CAGAAGGAATCCACTCTCCACCTTGTGCTCCGACTCCGA 3612502
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || || || || ||||| || |||||||||||||| || ||| ||
Sbjct 3612948 CAGATCTTTGTCAAGACCCTGACTGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGAT 3612889
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||||||||| || || || || |||||||||||
Sbjct 3612888 ACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATTCCCCCGGACCAGCAG 3612829
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|||||||||||||| || || |||||||| || ||| | ||||| |||| || ||| ||
Sbjct 3612828 CGACTTATCTTCGCTGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTACAACATC 3612769
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || ||||| || | ||||| ||
Sbjct 3612768 CAGAAGGAGTCTACTCTCCATCTGGTCCTCCGACTCCGA 3612730
Score = 140 bits (154), Expect = 8e-28
Identities = 149/197 (76%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || ||||| ||||| || ||||| |||||||| || ||| ||
Sbjct 3613387 CAGATTTTCGTGAAGACCCTCACTGGAAAGACCATCACTCTCGAGGTTGAGTCCTCCGAT 3613328
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 3613327 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 3613268
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| || ||||| || || ||||| || ||||| | || || | || || ||| ||
Sbjct 3613267 CGACTCATTTTCGCTGGTAAGCAGCTTGAGGATGGCCGAACCCTCTCTGACTACAACATC 3613208
Query 178104 CAAAAAGAATCAACACT 178120
|| || || || || ||
Sbjct 3613207 CAGAAGGAGTCTACTCT 3613191
Score = 140 bits (154), Expect = 8e-28
Identities = 128/162 (79%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036
||| ||||||||||| |||||||| |||||||||||||| || ||||| || |||||
Sbjct 3613562 CTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGA 3613503
Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096
|||||| ||||| || |||||||| || |||||||| || ||| | ||||| |||| ||
Sbjct 3613502 CCAGCAGCGACTCATTTTCGCCGGTAAGCAGCTCGAGGACGGACGAACTCTGTCCGACTA 3613443
Query 178097 TAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138
||| |||| || || || || || ||||| ||| | ||||
Sbjct 3613442 CAACATCCAGAAGGAGTCTACTCTCCATCTGGTTCTCCGACT 3613401
>seq2
Length=4160336
Score = 170 bits (188), Expect = 5e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||| || || || || || || || || |||||||| |||||||| || |||
Sbjct 1074826 CAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 1074885
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||||| |||||||| || ||||| || |||||||||||
Sbjct 1074886 ACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAGCAG 1074945
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||||||||||||||| || |||||||| || || | || ||| | || || ||| ||
Sbjct 1074946 CGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAACATC 1075005
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || || ||||| ||| || ||||| ||
Sbjct 1075006 CAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGA 1075044
Score = 161 bits (178), Expect = 2e-34
Identities = 167/219 (76%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| || || || || || || || || || ||||||||||||||||| || |||
Sbjct 1737017 CAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCGAC 1736958
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| ||||| |||||||| || || || || |||||||||||
Sbjct 1736957 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAG 1736898
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| || |||||||| || |||||||| || || | |||||| | || || ||| ||
Sbjct 1736897 CGACTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACATC 1736838
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|| || || || || ||||| ||||| || ||||| ||
Sbjct 1736837 CAGAAGGAGTCCACTCTGCACCTTGTCCTGCGACTCCGA 1736799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730567664954
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |