Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030695_20[genbank_20GCA_5F001602355.1_202016-
03-01] 41 sequences; 21,900,276 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq1 140 3e-28
>seq2
Length=4160336
Score = 150 bits (166), Expect = 2e-31
Identities = 174/232 (75%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691
||| || || || || || | || ||||| || ||| ||||||||| ||||| |||||
Sbjct 1075053 ACCACCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTC 1074994
Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751
|| ||||| || |||| ||||||||||| |||||||| || || ||||| |||||||
Sbjct 1074993 AGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGG 1074934
Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACT 41810
||||| | |||||||||| ||| || ||| ||| | | | |||||| ||||
Sbjct 1074933 GGGAATTCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACT 1074875
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||||| | || || || ||||| || || ||||| || |||||||||||
Sbjct 1074874 CCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1074823
Score = 141 bits (156), Expect = 9e-29
Identities = 169/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | || || ||||| ||| ||||||||| ||||| ||||| ||
Sbjct 1736794 CCTCCTCGGAGTCGCAGGACAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1736853
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| |||||||||||||||||||| ||||| ||||| ||||||| ||||
Sbjct 1736854 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAAATCAGTCGCTGCTGGTCCGGGGGA 1736913
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||||||
Sbjct 1736914 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCAATGGTGTCGGAAGACTCCAC 1736972
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCA 41861
||| | || || || || || || || ||||| || || || ||||
Sbjct 1736973 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 1737019
>seq1
Length=4858313
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || || || | ||| || || || ||| |||||||| ||||| ||||||||
Sbjct 3612496 GCCACCTCGGAGTCGGAGCACAAGGTGGAGAGTGGATTCCTTCTGGATGTTGTAGTCGGA 3612555
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||| || |||| || |||||||| |||||||| || || ||||| ||||||| |||
Sbjct 3612556 GAGGGTTCGTCCGTCCTCAAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGG 3612615
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| || ||| ||| | | | |||||| ||||| |
Sbjct 3612616 GATACCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATAGTGTCAGAAGACTCGA 3612674
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| ||||||||||||||
Sbjct 3612675 CCTCGAGGGTGATGGTCTTTCCGGTAAGGGTCTTCACGAAAATCTGCAT 3612723
Score = 129 bits (142), Expect = 5e-25
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||||| || || ||||||||| ||||| ||||||||
Sbjct 3612725 CCACCTCGGAGTCGGAGGACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3612784
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| ||||||||||| || ||||| || || ||||| ||||||| ||||
Sbjct 3612785 AGAGTTCGTCCGTCCTCGAGCTGCTTACCAGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 3612844
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| | || | | ||| | | | || ||| ||||| ||
Sbjct 3612845 ATACCCTCCTTGTCC-TGAATCTTGGACTTGACGTTGTCAATGGTATCGGAGGACTCAAC 3612903
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || ||||| ||||| || || ||||||||
Sbjct 3612904 CTCGAGGGTGATGGTCTTTCCAGTCAGGGTCTTGACAAAGATCTGCAT 3612951
Score = 125 bits (138), Expect = 7e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Plus
Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730
||||||||| ||||| ||||| |||||||| || | || || |||||||| || |||||
Sbjct 3613199 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCATCCTCAAGCTGCTTACCAGCGAA 3613258
Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790
|| || ||||| ||||||| ||||| || |||||||||| ||| || ||| | ||
Sbjct 3613259 AATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 3613317
Query 41791 CGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849
| || | | ||| ||||| ||||| | || || || || || || || ||||| |
Sbjct 3613318 TGTCAATGGTATCGGAGGACTCAACCTCGAGAGTGATGGTCTTTCCAGTGAGGGTCTTCA 3613377
Query 41850 CGAAAATCTGCAT 41862
|||||||||||||
Sbjct 3613378 CGAAAATCTGCAT 3613390
Score = 113 bits (124), Expect = 4e-20
Identities = 106/135 (79%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||||| || || ||||||||| ||||| ||||||||
Sbjct 3613392 CCACCTCGAAGTCGGAGAACCAGATGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 3613451
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || |||| ||||||||||| |||||||| || || ||||| ||||||| ||||
Sbjct 3613452 AGAGTTCGTCCGTCCTCGAGCTGCTTACCGGCGAAAATGAGTCGCTGCTGGTCCGGGGGA 3613511
Query 41756 ACGCTCTCCTTGTCC 41770
| | ||||||||||
Sbjct 3613512 ATTCCCTCCTTGTCC 3613526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303763069200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |