Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3 147 2e-30
>seq3
Length=2682169
Score = 147 bits (162), Expect = 2e-30
Identities = 471/726 (65%), Gaps = 16/726 (2%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| ||| || || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 1914852 TGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCC 1914911
Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || |||| || || | | | |
Sbjct 1914912 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GAGTTTCCGAGGGCCACCAGCA 1914969
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| || || ||||| || || || |||||||| | | | |||||| || | ||||
Sbjct 1914970 GCCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGAC 1915029
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911
|| || || || |||| || ||||| || |||| || || ||| | |
Sbjct 1915030 CGCAGGGGAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGT 1915089
Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971
|| | | || | || ||| || | | || || |||| |||||| || ||
Sbjct 1915090 CCTCGACAATCTT--CTTGGAGGGCCGGTTCTCGAGGTGCGAGAACAGCAGACAGGCAAA 1915147
Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031
|| || | |||||||||| | ||| || ||||| || || |||| ||||||||
Sbjct 1915148 GTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCAT 1915207
Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091
||||| ||||| | ||| || || | ||| ||||| || || || || || |||||
Sbjct 1915208 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTC 1915267
Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151
|||| ||||| || || | ||| ||| | | || | || | || ||||| ||
Sbjct 1915268 CACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCGTCGTCGGAGATCCACTT 1915327
Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207
|| |||| ||||| || | ||| ||||| || || || ||||| || || ||
Sbjct 1915328 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCGTTGAACAGGTA 1915387
Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
||| || ||| |||| | || || || ||||| || || ||| |||| |
Sbjct 1915388 GGTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTTTCCG 1915443
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| ||||| ||| || | || |
Sbjct 1915444 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCA 1915503
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || || | || || ||| | || || ||||| ||||||||||| ||||| || |
Sbjct 1915504 CCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCAAAGA 1915563
Query 17388 ACGCCA 17393
| ||||
Sbjct 1915564 AGGCCA 1915569
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545347696520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |