Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3 147 2e-30 >seq3 Length=2682169 Score = 147 bits (162), Expect = 2e-30 Identities = 471/726 (65%), Gaps = 16/726 (2%) Strand=Plus/Plus Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735 ||||| ||| || || || ||||| ||||| || ||||| | || || || |||||| Sbjct 1914852 TGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCC 1914911 Query 16736 ATGAAATCAAAAGGATTAGT--AGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 ||||| || || || || || || || | | || |||| || || | | | | Sbjct 1914912 ATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTG--GAGTTTCCGAGGGCCACCAGCA 1914969 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 | || || ||||| || || || |||||||| | | | |||||| || | |||| Sbjct 1914970 GCCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGAC 1915029 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911 || || || || |||| || ||||| || |||| || || ||| | | Sbjct 1915030 CGCAGGGGAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGT 1915089 Query 16912 ACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAA 16971 || | | || | || ||| || | | || || |||| |||||| || || Sbjct 1915090 CCTCGACAATCTT--CTTGGAGGGCCGGTTCTCGAGGTGCGAGAACAGCAGACAGGCAAA 1915147 Query 16972 ATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT 17031 || || | |||||||||| | ||| || ||||| || || |||| |||||||| Sbjct 1915148 GTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCAT 1915207 Query 17032 CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTC 17091 ||||| ||||| | ||| || || | ||| ||||| || || || || || ||||| Sbjct 1915208 GAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTC 1915267 Query 17092 GACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTT 17151 |||| ||||| || || | ||| ||| | | || | || | || ||||| || Sbjct 1915268 CACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCGTCGTCGGAGATCCACTT 1915327 Query 17152 CTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TA 17207 || |||| ||||| || | ||| ||||| || || || ||||| || || || Sbjct 1915328 GAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCGTTGAACAGGTA 1915387 Query 17208 ATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267 ||| || ||| |||| | || || || ||||| || || ||| |||| | Sbjct 1915388 GGTTCGCT----CCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTTTCCG 1915443 Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327 |||| ||||||||||| ||||| || ||||| ||||| ||| || | || | Sbjct 1915444 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTGCA 1915503 Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387 | || || | || || ||| | || || ||||| ||||||||||| ||||| || | Sbjct 1915504 CCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCAAAGA 1915563 Query 17388 ACGCCA 17393 | |||| Sbjct 1915564 AGGCCA 1915569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545347696520