Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq6 86.0 5e-12
>seq6
Length=1650383
Score = 86.0 bits (94), Expect = 5e-12
Identities = 262/402 (65%), Gaps = 10/402 (2%)
Strand=Plus/Plus
Query 18616 TTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGT 18675
||||||| | || |||||||| || || | | | ||| |||||||| || | ||||
Sbjct 1314531 TTCCTCTGCTCACCACAAAGCGGGTCTTCTACCGAGGCGTTTTGGAAGAGCTGCTGTGGT 1314590
Query 18676 TTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATA 18735
|| | ||| | ||||| ||| | || || || | || ||||| |||||
Sbjct 1314591 TTGTGGCCGGATGTACCGACGGCAAGAAGCTGAGCGAAAAGAACATTCACATCTGGGACG 1314650
Query 18736 TATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACC 18795
| ||||||| | | ||||| | | | ||| | | |||| ||| ||||
Sbjct 1314651 GAAACGGATCCAAGGAGTTTCTGGAGAAGGCTGGACTGGGACACAGACGTGAGGGAGACC 1314710
Query 18796 TTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAAT 18855
| || ||| | || |||||||| ||| | ||||||||||| || || |||||||| |
Sbjct 1314711 TGGGACCCGTGTATGGCTTCCAATGGCGTCATTTTGGAGCCGAGTACAAAGACTGCGACA 1314770
Query 18856 CAAACTATTTACAG----CAAGGAATCGATCAGCTGCAAAC-TGTTATAGATACAATTAA 18910
|| || ||||| || || | |||||||| ||| | || || | || | ||
Sbjct 1314771 CAGAC----TACAGTGGCCAGGGCGTGGATCAGCT-CAAGCAGGTGATTCACACTCTCAA 1314825
Query 18911 AACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTT 18970
|| ||||| | ||||||||| ||| | || | ||||| || ||| | ||
Sbjct 1314826 GACCAACCCCCAGGACCGACGAATCATTCTGTCTGCATGGAACCCTGCCGATCTGTCCAA 1314885
Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012
|||| || ||||| ||||||| ||| || ||||| || ||
Sbjct 1314886 GATGGCTCTGCCTCCCTGTCACATGTTCTGCCAGTTCTATGT 1314927
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399503810110755
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |