Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 5e-12 >seq6 Length=1650383 Score = 86.0 bits (94), Expect = 5e-12 Identities = 262/402 (65%), Gaps = 10/402 (2%) Strand=Plus/Plus Query 18616 TTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGGGCCGTCGTGGAAGAGTTGTTATGGT 18675 ||||||| | || |||||||| || || | | | ||| |||||||| || | |||| Sbjct 1314531 TTCCTCTGCTCACCACAAAGCGGGTCTTCTACCGAGGCGTTTTGGAAGAGCTGCTGTGGT 1314590 Query 18676 TTATCCGCGGGTCAACCGATTCCAAAGAACTCGCCGCTAAAGATATACACATATGGGATA 18735 || | ||| | ||||| ||| | || || || | || ||||| ||||| Sbjct 1314591 TTGTGGCCGGATGTACCGACGGCAAGAAGCTGAGCGAAAAGAACATTCACATCTGGGACG 1314650 Query 18736 TATACGGATCGAGCAAATTTCTAAATAGGAATGGCTTCCATAAAAGACACACGGGGGACC 18795 | ||||||| | | ||||| | | | ||| | | |||| ||| |||| Sbjct 1314651 GAAACGGATCCAAGGAGTTTCTGGAGAAGGCTGGACTGGGACACAGACGTGAGGGAGACC 1314710 Query 18796 TTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGACTGTCAAT 18855 | || ||| | || |||||||| ||| | ||||||||||| || || |||||||| | Sbjct 1314711 TGGGACCCGTGTATGGCTTCCAATGGCGTCATTTTGGAGCCGAGTACAAAGACTGCGACA 1314770 Query 18856 CAAACTATTTACAG----CAAGGAATCGATCAGCTGCAAAC-TGTTATAGATACAATTAA 18910 || || ||||| || || | |||||||| ||| | || || | || | || Sbjct 1314771 CAGAC----TACAGTGGCCAGGGCGTGGATCAGCT-CAAGCAGGTGATTCACACTCTCAA 1314825 Query 18911 AACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCCTT 18970 || ||||| | ||||||||| ||| | || | ||||| || ||| | || Sbjct 1314826 GACCAACCCCCAGGACCGACGAATCATTCTGTCTGCATGGAACCCTGCCGATCTGTCCAA 1314885 Query 18971 AATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGT 19012 |||| || ||||| ||||||| ||| || ||||| || || Sbjct 1314886 GATGGCTCTGCCTCCCTGTCACATGTTCTGCCAGTTCTATGT 1314927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399503810110755