Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 219 5e-52 >seq6 Length=1650383 Score = 219 bits (242), Expect = 5e-52 Identities = 482/721 (67%), Gaps = 25/721 (3%) Strand=Plus/Minus Query 145564 GCGTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCC 145623 || ||||| | ||| ||||| ||| ||||||| || | ||||||| || || |||| Sbjct 1315248 GCCTGGGGCTTGTATCCCTCGAGCACAAAGTCGTCGTACTTGAAGTCGTCGATATCCTTA 1315189 Query 145624 ACCCGCCTCAGG--ATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCT 145681 | | ||| || | | | ||| |||| || | ||| | | | | ||| ||| Sbjct 1315188 AT--GTCTCGGGCAAACGTCAGCTTGGGGAACTCTCCGGGAGTTCGAGAAATCTGCTGCT 1315131 Query 145682 TCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCC 145741 |||||| |||||||||| ||| ||||| ||||| |||| |||||||| || | Sbjct 1315130 TCAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGC 1315071 Query 145742 CGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGT 145801 | || || | || | ||||| | ||| |||| ||| | ||| ||| |||| Sbjct 1315070 CACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGT 1315011 Query 145802 TGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGC--TC 145859 ||||||| || ||||| |||| || | || ||||||||||||||||| || ||| | Sbjct 1315010 TGAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGC 1314951 Query 145860 CCCGC-------------CCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGG 145906 ||||| || ||| ||||||||||| | | ||| ||||| ||||| | Sbjct 1314950 CCCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAG 1314891 Query 145907 CCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGT 145966 |||| || ||| || || |||||||| || | || | || | | | || ||||| Sbjct 1314890 CCATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGGGT 1314831 Query 145967 TCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTG 146026 | |||||| |||| | | ||||||| ||||||||||| || | ||| |||| Sbjct 1314830 TGGTCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTCTG 1314771 Query 146027 TCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCA 146086 | | | |||| |||| |||| || || || | ||| ||||| || || ||||| |||| Sbjct 1314770 TGTCGCAGTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTCCCA 1314711 Query 146087 GGTCCCCGGGCTC---CCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGT 146143 |||| || ||| ||||| ||||| || ||| | || || ||| ||| |||| Sbjct 1314710 GGTCTCC---CTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCGT 1314654 Query 146144 TGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGA 146203 | |||||||||| | | | | | || |||| ||| ||| || | || | Sbjct 1314653 TTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCA 1314594 Query 146204 TGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGG 146263 ||||| ||||||||||| | || || | ||||||||| ||| ||||| ||||| | Sbjct 1314593 CAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGAG 1314534 Query 146264 G 146264 | Sbjct 1314533 G 1314533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076512337560