Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq3 513 1e-140
seq2 150 2e-31
seq7 129 6e-25
>seq3
Length=2682169
Score = 513 bits (568), Expect = 1e-140
Identities = 640/865 (74%), Gaps = 19/865 (2%)
Strand=Plus/Minus
Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635
||||||||||| ||||||| ||| ||||| ||| | |||||||| || |||| ||
Sbjct 1915756 GAGCCGCTGCTCAAGGAGAACCACCGGCGGTTTGTGCTCTTCCCCATCCAGTACCACGAG 1915697
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||||||||||||||| | |||||| | || ||
Sbjct 1915696 ATCTGGCAGATGTACAAGAAGGCCGAGGCGTCGTTCTGGACGGCCGAGGAAATCGATCTC 1915637
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | ||||||||||| || | ||| || ||||||| ||||||
Sbjct 1915636 GGCAAGGACATGGGCGACTGGGAGAACCGGCTCAACAACGACGAGCGGTTCTTCATCTCC 1915577
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
|||||||||||||| || |||||| |||||||||||||||||||| ||||| |||||
Sbjct 1915576 CACGTGCTGGCCTTCTTTGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTGGAGCGG 1915517
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
|| | |||||||||| ||||||| ||||||||||||||| |||||| |||
Sbjct 1915516 TTTTCCGGCGAGGTGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATG 1915457
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929
|||||| | |||||||||| || ||| || |||||||| ||| | | | | |
Sbjct 1915456 GAGAACATCCACTCGGAAACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAG 1915397
Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989
||| ||| || | | ||| |||||||||||||| || || ||| |||| ||||||||
Sbjct 1915396 GAGC-GAACCTACCT--GTTCAACGCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCC 1915340
Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049
|| |||||||| |||||| ||| | ||| || |||| |||||||| || | |||
Sbjct 1915339 GACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCCACCTTTGGCGAGCGACTCATTGCC 1915280
Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109
|| || ||||| |||||| |||| || || ||| || ||| |||| || |||||||||
Sbjct 1915279 TTTGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAG 1915220
Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169
|| || || ||||||||||||||||| ||| |||||||||||||||| | |||||||||
Sbjct 1915219 AAGCGAGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGT 1915160
Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229
||||| |||||||||||| |||||||| ||| | | | | || || | | |
Sbjct 1915159 CTGCACACGGACTTTGCCTGTCTGCTGTTCTCGCACCTCGAGAACCGGCCCTCCAAGAAG 1915100
Query 117230 CGCGTC-AGG--GAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAA 117286
||| ||| | ||| || ||| || || | |||||||||| ||||| |||||
Sbjct 1915099 ATTGTCGAGGACGTGATTGT---CGAGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGAC 1915043
Query 117287 GCGCTGCCGGTGC-GTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGT 117344
||||| || ||| |||||||||| | || || || | |||| || ||||| ||||
Sbjct 1915042 GCGCT-CCCCTGCGGTCTGCTGGGCATGAA-CGCCAAGCTCATGTGCCAGTACATTGAGT 1914985
Query 117345 TCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACC 117404
| || |||||| |||||||| | | || | | ||||| ||||||| | ||||||
Sbjct 1914984 TTGTGGCCGACCGGCTGCTGGTGGCCCTCGGAAACTCCAAGGTCTACAACTCCACCAACC 1914925
Query 117405 CGCTGGACTTTATGAACCTCATCTC 117429
| | ||||| ||| | ||||||
Sbjct 1914924 CCTTCGACTTCATGGAGAACATCTC 1914900
>seq2
Length=2949780
Score = 150 bits (166), Expect = 2e-31
Identities = 164/215 (76%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 40691 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCG 40750
||||||| || || || || || || ||||| ||||||||| |||| || || | |||
Sbjct 2456518 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 2456577
Query 40751 ACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||||||
Sbjct 2456578 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2456636
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| |||||||||| ||| ||||| ||||| || |||| || || || |||||||||
Sbjct 2456637 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAAC 2456696
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
|||||||||||| |||| ||||| || || ||||
Sbjct 2456697 ATCCAGAAGGAGTCCACTCTGCACCTGGTTCTGCG 2456731
>seq7
Length=1109975
Score = 129 bits (142), Expect = 6e-25
Identities = 161/218 (74%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 40688 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA 40747
||||||| || || || || || || || || || || |||||| | || || || |
Sbjct 1062554 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 1062613
Query 40748 CCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806
|||||| | | | |||| ||||| || || | ||||| ||||| || ||| |||||
Sbjct 1062614 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 1062672
Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866
||||| ||||| |||| ||| || || ||||| || |||| || ||||| ||||||
Sbjct 1062673 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 1062732
Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904
||||||||||||||| |||| || ||||| || ||||
Sbjct 1062733 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 1062770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515218948830640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |