Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq6 138 8e-28 >seq6 Length=1650383 Score = 138 bits (152), Expect = 8e-28 Identities = 433/665 (65%), Gaps = 27/665 (4%) Strand=Plus/Minus Query 96984 AATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGT 97043 ||| | || ||||||| | || | ||||| | ||||||||| | || ||||| | Sbjct 1315189 AATGTCTCGGGCAAACGTCAGCTTGGGGAACTCTCCGGGAGTTCGAGAAATCTGCTGCTT 1315130 Query 97044 GAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCC 97103 || ||||| | ||| | | || | |||||| ||||| | |||||| || | || || Sbjct 1315129 CAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCC 1315070 Query 97104 AGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTT 97163 | | | ||| || || ||||| ||||| | ||| || |||| || |||||||| Sbjct 1315069 ACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTT 1315010 Query 97164 AAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCC 97223 || || || || || |||| |||| || | || || | ||| || || ||| || Sbjct 1315009 GAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCC 1314950 Query 97224 A----------TC----AC-ACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268 || || ||||||| ||||| | || | |||||||| |||| || Sbjct 1314949 CCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGC 1314890 Query 97269 CATTTTTGGAACATCTAAGACA---TTCCAAGCACACATCAACATTCTTCTATCGGTTGG 97325 ||| || | | ||| | || ||||| ||| ||| | |||| || || || Sbjct 1314889 CATCTTGGACAGATC---GGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGG 1314833 Query 97326 GTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT- 97384 ||| || | | || | ||| | |||||| | ||||| ||||| | |||| || | Sbjct 1314832 GTTGGTCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTC 1314773 Query 97385 TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTC 97444 |||| || | ||| || || ||||||||||| | ||||||||| ||||| || |||| Sbjct 1314772 TGTGTCGCAGTCTTTG-TACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTC 1314714 Query 97445 CAAGGTCTCCTT--CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCC 97502 | |||||||| | | ||| | || ||| ||| ||| || | | | | | ||||| Sbjct 1314713 CCAGGTCTCCCTCACGTCTGTGTCCCAG--TCCAGCCTTCTCCAGAAACTCCTTGGATCC 1314656 Query 97503 ATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCT 97562 ||| | ||||| ||||| | | | |||| |||| ||| ||| |||| Sbjct 1314655 GTTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGC 1314596 Query 97563 GATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAG 97622 | |||||||| || ||||||| ||| |||| | || || | ||| || || | || Sbjct 1314595 CACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAG 1314536 Query 97623 AGGAA 97627 ||||| Sbjct 1314535 AGGAA 1314531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783835169230