Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq6 138 8e-28
>seq6
Length=1650383
Score = 138 bits (152), Expect = 8e-28
Identities = 433/665 (65%), Gaps = 27/665 (4%)
Strand=Plus/Minus
Query 96984 AATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGT 97043
||| | || ||||||| | || | ||||| | ||||||||| | || ||||| |
Sbjct 1315189 AATGTCTCGGGCAAACGTCAGCTTGGGGAACTCTCCGGGAGTTCGAGAAATCTGCTGCTT 1315130
Query 97044 GAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCC 97103
|| ||||| | ||| | | || | |||||| ||||| | |||||| || | || ||
Sbjct 1315129 CAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCC 1315070
Query 97104 AGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTT 97163
| | | ||| || || ||||| ||||| | ||| || |||| || ||||||||
Sbjct 1315069 ACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTT 1315010
Query 97164 AAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCC 97223
|| || || || || |||| |||| || | || || | ||| || || ||| ||
Sbjct 1315009 GAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCC 1314950
Query 97224 A----------TC----AC-ACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268
|| || ||||||| ||||| | || | |||||||| |||| ||
Sbjct 1314949 CCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGC 1314890
Query 97269 CATTTTTGGAACATCTAAGACA---TTCCAAGCACACATCAACATTCTTCTATCGGTTGG 97325
||| || | | ||| | || ||||| ||| ||| | |||| || || ||
Sbjct 1314889 CATCTTGGACAGATC---GGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGG 1314833
Query 97326 GTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAAT- 97384
||| || | | || | ||| | |||||| | ||||| ||||| | |||| || |
Sbjct 1314832 GTTGGTCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTC 1314773
Query 97385 TGTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTC 97444
|||| || | ||| || || ||||||||||| | ||||||||| ||||| || ||||
Sbjct 1314772 TGTGTCGCAGTCTTTG-TACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTC 1314714
Query 97445 CAAGGTCTCCTT--CTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCC 97502
| |||||||| | | ||| | || ||| ||| ||| || | | | | | |||||
Sbjct 1314713 CCAGGTCTCCCTCACGTCTGTGTCCCAG--TCCAGCCTTCTCCAGAAACTCCTTGGATCC 1314656
Query 97503 ATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCT 97562
||| | ||||| ||||| | | | |||| |||| ||| ||| ||||
Sbjct 1314655 GTTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGC 1314596
Query 97563 GATAAACCACAACAATTCTTCCACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAG 97622
| |||||||| || ||||||| ||| |||| | || || | ||| || || | ||
Sbjct 1314595 CACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAG 1314536
Query 97623 AGGAA 97627
|||||
Sbjct 1314535 AGGAA 1314531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346783835169230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |