Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
seq7 96.9 3e-15
seq5 82.4 7e-11
>seq2
Length=2949780
Score = 107 bits (118), Expect = 2e-18
Identities = 166/236 (70%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||||||| || | | || |||| ||| | || ||||| || || |||||||| ||
Sbjct 2456745 TACCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAG 2456686
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
| ||| || ||||||||||| || || ||| ||||||| |||||||| || || |
Sbjct 2456685 AAAGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGG 2456626
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| |||||||||||||| || || || || | || | |||||| | ||| |
Sbjct 2456625 GAATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCA 2456566
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTA 118744
|||||| ||| | || ||||| || || || || ||||| || |||| ||| |||
Sbjct 2456565 CCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTGGGTTA 2456510
>seq7
Length=1109975
Score = 96.9 bits (106), Expect = 3e-15
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| || ||||| || || |||||||| || | || || |||||||||||
Sbjct 1062758 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGC 1062699
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| || ||| |||| || |||||||| || || || || ||||||||||| || ||
Sbjct 1062698 TTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTG 1062639
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
|| || | |||| |||||| | ||| ||||| | ||| | || || |||||
Sbjct 1062638 GACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTA 1062579
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
|| || || ||||||||||||||
Sbjct 1062578 AGGGTCTTGACAAAAATCTGCAT 1062556
>seq5
Length=1963011
Score = 82.4 bits (90), Expect = 7e-11
Identities = 108/150 (72%), Gaps = 0/150 (0%)
Strand=Plus/Minus
Query 133221 TGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTCTGAGATATACATTCGACGTGAAC 133280
||||||||||| ||||||||||||| | || || | || || | || |||||| |
Sbjct 1038373 TGGTTGACCACCAGAAACTCGCCGGCCTGCACTCGCCGCAGGTAAATGTTGGACGTGTAG 1038314
Query 133281 GGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCCGTCGTCGCCGTGGGCATGTACGCC 133340
|| ||||| | ||||||| |||||| ||||| | || | || || |||||| |||
Sbjct 1038313 GGCTCGAAGCACTCGTTGTGGCCGAGGATCTGGGAGGTAGAAGCGGTAGGCATGGGAGCC 1038254
Query 133341 ACCAACAAAGAGTTTCTTACGCCGTACTTG 133370
|||| || ||||| | | ||| | ||||
Sbjct 1038253 ACCAGCAGCGAGTTGCGCATGCCATGCTTG 1038224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433830193794988
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |