Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq2 150 2e-31
seq7 111 2e-19
>seq2
Length=2949780
Score = 150 bits (166), Expect = 2e-31
Identities = 171/227 (75%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016
||||||| | ||||| |||| |||| ||| |||||| || || ||||| ||||
Sbjct 2456743 CCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2456684
Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076
||||| || |||| || |||||||| || ||||| ||||||||||||||||| | ||
Sbjct 2456683 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGA 2456624
Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCG-TGTCGCTCGATTCCAC 43135
| || |||||||||| ||| || |||| ||| | || | ||||| || |||||
Sbjct 2456623 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCAC 2456565
Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCA 43182
|||| |||||||| ||||| || || ||||| |||||||||||||
Sbjct 2456564 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518
>seq7
Length=1109975
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028
|||| || | ||| | ||| |||||| || || ||||| |||| || || || ||
Sbjct 1062770 CGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG 1062711
Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088
|| || ||||||||||| ||||| || |||||||||||||| | || | | |||||||
Sbjct 1062710 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 1062651
Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147
||| ||| || |||| ||| | | | |||||| || ||||| || | |||||
Sbjct 1062650 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 1062592
Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTT 43185
|| || || || || ||||| ||||| || |||||||
Sbjct 1062591 AGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1062554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571817321238920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |