Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq2 178 2e-39
seq3 165 1e-35
>seq2
Length=2949780
Score = 178 bits (196), Expect = 2e-39
Identities = 461/700 (66%), Gaps = 2/700 (0%)
Strand=Plus/Plus
Query 65984 GAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCA 66043
||||||||| || | || | || | || ||||| || | || ||||| | | |||
Sbjct 79993 GAACTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCA 80052
Query 66044 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAA 66103
||| ||| | || ||||| | ||| || || || || ||||| ||||| | || |
Sbjct 80053 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAG 80112
Query 66104 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 66163
||||| || || | ||||| || || |||||| || ||| |||| | | |
Sbjct 80113 ATCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAC 80172
Query 66164 ATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 66223
|| | ||||| || |||| ||| ||||| | |||| || || ||||| || |||||
Sbjct 80173 GTCGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTG 80232
Query 66224 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 66283
|| | ||||| ||||||||| || || |||| || ||| || | ||||| ||||| ||
Sbjct 80233 GTCGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGT 80292
Query 66284 ACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTAT 66343
|| ||||| || | ||| ||| || | || || || || || || ||||| ||
Sbjct 80293 TCCGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAAT 80352
Query 66344 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 66403
|| || || || || || | || || || | || || |||||||| || ||
Sbjct 80353 GCCTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGTAGATGCCGTCGAT 80412
Query 66404 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 66463
|| ||| ||||||| | || ||||| ||||| ||| | | || || ||
Sbjct 80413 GGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGC 80472
Query 66464 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCT 66522
|| | | ||| |||||||| || || || | || | ||| | |||| ||||| ||||
Sbjct 80473 GTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAG-TTGTAGGTCT 80531
Query 66523 CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 66582
| |||||| | | || || || || || || | || ||||| | ||| ||||
Sbjct 80532 CGATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCT 80591
Query 66583 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 66642
||||||| ||| | | ||| | | || || ||| | | |||| ||| || |
Sbjct 80592 GAGGTCTCTCAGCAACGGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651
Query 66643 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 66682
| ||||| |||||||| | ||||||| ||||| | |||
Sbjct 80652 AGCCAAAGTAGTTGTAGGTGAAGTCTCTGTCGTAGAGAAT 80691
>seq3
Length=2682169
Score = 165 bits (182), Expect = 1e-35
Identities = 397/597 (66%), Gaps = 8/597 (1%)
Strand=Plus/Plus
Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208
|||| || ||| || || || ||| ||||||||||||| || | ||||||||
Sbjct 1915131 AACAGCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 1915190
Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268
|| || || |||||||| || || ||||| || ||||| || ||||| ||||| || ||
Sbjct 1915191 AAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCG 1915250
Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT- 36327
|| || || || || || || || ||||||||||| |||| ||| ||| || | |||
Sbjct 1915251 GAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCA-AAGGTGGACTC 1915309
Query 36328 ---GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTC 36384
||| |||||||| | ||||| ||||||||||| || | || || || |||||
Sbjct 1915310 GTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTC 1915369
Query 36385 TATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAG 36444
|| || || || || ||| || || || || || | ||||| || |||| ||
Sbjct 1915370 GATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAG 1915429
Query 36445 ACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 36504
|| ||||||| || ||||| || || || || || |||||||| || | ||
Sbjct 1915430 CGAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGC 1915489
Query 36505 CTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTC 36564
||||| ||| || || |||| || || | | || || || || || |||||
Sbjct 1915490 CTCGGGGGCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTC 1915549
Query 36565 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--TTGGTG-TTAG 36621
||| ||||| || |||| || || || || | |||| ||| || |
Sbjct 1915550 CGAGGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCG 1915609
Query 36622 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 36681
|| | ||| || || || || | ||| | ||| || | ||||| || || ||
Sbjct 1915610 GTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGC 1915669
Query 36682 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738
||| ||||| || ||||| | |||||| || || || || || || || | |||||
Sbjct 1915670 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 1915726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658172479140760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |