Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq6 149 5e-31
>seq6
Length=1650383
Score = 149 bits (164), Expect = 5e-31
Identities = 397/603 (66%), Gaps = 23/603 (4%)
Strand=Plus/Minus
Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983
||||| ||| ||||||| ||||| ||||| ||||| |||| ||||| | | || ||
Sbjct 1315129 CAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCC 1315070
Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043
| ||| | || || || || |||| |||| || ||||| ||| |||||
Sbjct 1315069 ACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTT 1315010
Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGC--TCC 21101
|| ||||| || || |||| || ||||| ||||||||||||||| |||||| ||
Sbjct 1315009 GAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCC 1314950
Query 21102 CC---CCGA----------GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGC 21148
|| |||| | ||| || ||||| || || | |||||| ||||| |||||
Sbjct 1314949 CCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGC 1314890
Query 21149 CATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCG 21208
|||| | || || || |||||||| || ||| || ||| || || || |||| |
Sbjct 1314889 CATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGG---G 1314833
Query 21209 CCTGTTAATTAGA---TCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTT 21265
|| | | ||| | | ||| | ||||| ||||| ||||| || |||||
Sbjct 1314832 GTTGGTCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTC 1314773
Query 21266 GGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCC 21325
| |||| | ||||||| || |||||||| | ||| ||||| || ||||| || ||
Sbjct 1314772 TGTGTCGCAGTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTCC 1314713
Query 21326 CAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTG 21385
||| || ||||| || | || || | || | | ||| ||| | ||| ||||
Sbjct 1314712 CAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCGTT 1314653
Query 21386 CGCGTCCCAAATTTTTACG-CCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGA 21444
||||||| || | | | | ||| ||| | || |||||| | || |
Sbjct 1314652 TCCGTCCCAGATGTGAATGTTCTTTTCGC-TCAGCTTCTTGCCGTCGGTACATCCGGCCA 1314594
Query 21445 TAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAG 21504
||||||||||| ||| |||| ||||| | | || |||| || ||||| | |||||
Sbjct 1314593 CAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGAG 1314534
Query 21505 GAA 21507
|||
Sbjct 1314533 GAA 1314531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427775796672720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |