Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6 149 5e-31 >seq6 Length=1650383 Score = 149 bits (164), Expect = 5e-31 Identities = 397/603 (66%), Gaps = 23/603 (4%) Strand=Plus/Minus Query 20924 CAGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCC 20983 ||||| ||| ||||||| ||||| ||||| ||||| |||| ||||| | | || || Sbjct 1315129 CAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCC 1315070 Query 20984 CGGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTT 21043 | ||| | || || || || |||| |||| || ||||| ||| ||||| Sbjct 1315069 ACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTT 1315010 Query 21044 AAACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGC--TCC 21101 || ||||| || || |||| || ||||| ||||||||||||||| |||||| || Sbjct 1315009 GAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCC 1314950 Query 21102 CC---CCGA----------GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGC 21148 || |||| | ||| || ||||| || || | |||||| ||||| ||||| Sbjct 1314949 CCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGC 1314890 Query 21149 CATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCG 21208 |||| | || || || |||||||| || ||| || ||| || || || |||| | Sbjct 1314889 CATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGG---G 1314833 Query 21209 CCTGTTAATTAGA---TCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTT 21265 || | | ||| | | ||| | ||||| ||||| ||||| || ||||| Sbjct 1314832 GTTGGTCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTC 1314773 Query 21266 GGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCC 21325 | |||| | ||||||| || |||||||| | ||| ||||| || ||||| || || Sbjct 1314772 TGTGTCGCAGTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTCC 1314713 Query 21326 CAGATCGCCCTCGCGGCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTG 21385 ||| || ||||| || | || || | || | | ||| ||| | ||| |||| Sbjct 1314712 CAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCGTT 1314653 Query 21386 CGCGTCCCAAATTTTTACG-CCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGA 21444 ||||||| || | | | | ||| ||| | || |||||| | || | Sbjct 1314652 TCCGTCCCAGATGTGAATGTTCTTTTCGC-TCAGCTTCTTGCCGTCGGTACATCCGGCCA 1314594 Query 21445 TAAACCACAGCAACTCCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAG 21504 ||||||||||| ||| |||| ||||| | | || |||| || ||||| | ||||| Sbjct 1314593 CAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGAG 1314534 Query 21505 GAA 21507 ||| Sbjct 1314533 GAA 1314531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775796672720