Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq3 197 2e-45
seq2 187 4e-42
seq5 102 1e-16
>seq3
Length=2682169
Score = 197 bits (218), Expect = 2e-45
Identities = 402/596 (67%), Gaps = 6/596 (1%)
Strand=Plus/Plus
Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010
|||| || ||| || || || ||||||||||||||||| || || ||||||||
Sbjct 1915131 AACAGCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 1915190
Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070
|| || || |||||||| || || ||||| || ||||| || ||||| ||||| || ||
Sbjct 1915191 AAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCG 1915250
Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127
|| || ||||| || || || ||||||||||||| |||| ||| ||| | ||| ||
Sbjct 1915251 GAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCG 1915310
Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187
||| |||||||| | ||||| ||||||||||| || | || || || || ||
Sbjct 1915311 TCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCG 1915370
Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247
||||| || || || ||| || || || || || | || || ||||||| ||
Sbjct 1915371 ATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGC 1915430
Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307
|| ||||||| || ||||| || || ||||| || |||||||| || | |||
Sbjct 1915431 GAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCC 1915490
Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367
|||| |||||| || |||| || || | | || || || || || |||||
Sbjct 1915491 TCGGGGGCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCC 1915550
Query 50368 CTGGCTGCAAAAAACGCCAATACATG---TTTTATAAAATGTTTTTCGTTGGGTGTTAGT 50424
||| ||||| || |||| || || | | || | | |||||| |
Sbjct 1915551 GAGGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGG 1915610
Query 50425 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484
|| | ||| || || || || | ||| | ||| || | ||||| || || |||
Sbjct 1915611 TTCTCCCAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGCC 1915670
Query 50485 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
|| ||||| || ||||| | |||||| || || || ||||| ||||| | |||||
Sbjct 1915671 TCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 1915726
>seq2
Length=2949780
Score = 187 bits (206), Expect = 4e-42
Identities = 463/700 (66%), Gaps = 2/700 (0%)
Strand=Plus/Plus
Query 79863 GAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCA 79922
||||||||| || | || || || | || ||||| |||| || ||||| | | |||
Sbjct 79993 GAACTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCA 80052
Query 79923 CTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 79982
||| | | | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 80053 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAG 80112
Query 79983 ATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 80042
||||| || || | |||||| || || |||||| || ||| |||| | | |
Sbjct 80113 ATCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAC 80172
Query 80043 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTG 80102
|| ||||| || |||| ||| ||||| | |||| ||||| ||||| || |||||
Sbjct 80173 GTCGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTG 80232
Query 80103 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 80162
|| | ||||| ||||||||| || || |||| || ||| || | ||||| ||||| ||
Sbjct 80233 GTCGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGT 80292
Query 80163 ACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 80222
|| ||||| || | ||| ||| || | || || || || || || ||||| ||
Sbjct 80293 TCCGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAAT 80352
Query 80223 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 80282
|| || || || || || | || || || | || || |||||||| || ||
Sbjct 80353 GCCTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGTAGATGCCGTCGAT 80412
Query 80283 GCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 80342
| || || ||||||| | || ||||| ||||| ||| | | || || ||
Sbjct 80413 GGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGC 80472
Query 80343 ATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA-GTAGATTGTACGTCT 80401
|| | | ||| |||||||| || || || | || | ||||| |||| ||||| ||||
Sbjct 80473 GTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAG-TTGTAGGTCT 80531
Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461
| |||||| | || || || || || || | || ||||| | ||| ||||
Sbjct 80532 CGATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCT 80591
Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521
||||||| ||| | | || | | || || ||| | | |||| ||| || |
Sbjct 80592 GAGGTCTCTCAGCAACGGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651
Query 80522 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 80561
| ||||| |||||||| | ||||||| ||||| | |||
Sbjct 80652 AGCCAAAGTAGTTGTAGGTGAAGTCTCTGTCGTAGAGAAT 80691
>seq5
Length=1963011
Score = 102 bits (112), Expect = 1e-16
Identities = 465/721 (64%), Gaps = 26/721 (4%)
Strand=Plus/Minus
Query 79859 GTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGA-CATTCGTCAGGACACATCAAC 79917
|||| |||||| ||||| || || || | ||| ||| | ||| | ||||| | ||||
Sbjct 1037541 GTTCAAACTCGGGGCCCCACACGTCTTCCAGTCCCGGAGCCTTCTTG-GGACAGAACAAC 1037483
Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977
||||||| | | | || || || ||||| || || || || | ||| | ||
Sbjct 1037482 GACCACTTTTCGCCCCGCTCGACCCGCTTCATGAACAGGTCGGGCACCCACAATGCGTAG 1037423
Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTT---AAGATCGAGGAAC 80034
|| || || | || ||| | ||| ||| ||| || ||||| |||| ||| ||
Sbjct 1037422 AACAGGTCCCGGGCTCTGTTCTCTTCGGCTCC---ATGGTTTTTCCGCAGATTGAGAAAA 1037366
Query 80035 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTT 80094
| | ||| || | |||||||| |||| || ||||| | | || || || |||||
Sbjct 1037365 TCGAGAATGTCGGCGTGCCACGGCTCCAGATAGATGGCAAACGCGCCGGGACGCTTGTTC 1037306
Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154
|| ||||| || | ||| || |||||||| || | ||||| | ||| || | || |||
Sbjct 1037305 CCACCCTGGTCCACGTACCTCGCGGTGTTGTTGAACACTCTGAGCATGGGCACGATGCCA 1037246
Query 80155 TTGGATGTACCATTGGTCCCGGAGAT-ATAGCTTCCACTGGCACGAATATTACTAATTGA 80213
||||| | || | | ||| | || ||||| || |||| || || || ||
Sbjct 1037245 CTGGATCTTCCTTGAGACCCTGTAATAATAGC-GCCCTTGGCTCGGATGTTGTGGATATG 1037187
Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA-TCGT-TTTAACGTATCATAG 80271
||||| || || || || |||| |||||| |||||| ||| || | ||||| |||
Sbjct 1037186 CAGACCGATGCCGCCGGCGGTTTTCGAGATT--TGCGCACACGTCTTGAGGGTATCGTAG 1037129
Query 80272 ATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 80331
|| || || ||| || || |||| | |||||||| |||| ||| |
Sbjct 1037128 ATTCCGTCGATGGAGTCCGCAGCCATGGCCACCAGAAAACACGACGACAGCTGGCCCTGG 1037069
Query 80332 CTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA--GACAGTA 80389
|| || || || || | ||| ||||| || ||||| ||| || || |||||
Sbjct 1037068 GGGGTGCCTGCGTTGAAGAGGGTGGGAGAGGCATGCGTGAAC--TTGCGCAGCGACAGAG 1037011
Query 80390 GATTGTACGTCTCAATAGCTGATT--CTATATCCCATTGATGAATTCCTACCGCGACACG 80447
||||||| || ||| || | || || | || || || | || || ||
Sbjct 1037010 CGGTGTACGTGTC--GAGCACCTTGGCGATGTCGTCTCCGTGGATCCCCAGAGCCACGCG 1036953
Query 80448 CATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATT--TATTTTCAACAAGTAAGAT 80505
||| | |||||| ||||| | |||||| | | ||| | || || || || ||
Sbjct 1036952 CATGAGCATGTGTTGAGGACGTTCAAC--TATAGTTCCTCCGGTTCGCAGCAGATAGGAC 1036895
Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 80565
||||||| || || || ||||| || ||| | | |||||| ||||| | |||| ||
Sbjct 1036894 TTTTCCAGCGTCTTGAAGCCAAAGTACGAGTAGGTGAGGTCTCGGTCGTAGACAATAGCC 1036835
Query 80566 G 80566
|
Sbjct 1036834 G 1036834
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718268449843960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |