Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq3 87.8 2e-12
>seq3
Length=2682169
Score = 87.8 bits (96), Expect = 2e-12
Identities = 285/437 (65%), Gaps = 12/437 (3%)
Strand=Plus/Minus
Query 50405 CTTTGGCCGAACGTTTAGTGGCGTTTGCCATAGTTGAAGGTGTGtttttttCCGGTAGCT 50464
||||||| || || | | || |||||| || || || | ||||| ||||| |
Sbjct 1915301 CTTTGGC-GAGCGACTCATTGCCTTTGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGT 1915243
Query 50465 TTGCAGCCATATTTTACATTAAAACCTTAGGCATAATGCCCGGCCTCACGTTTAGCAACG 50524
|||| |||| || | | || | ||| | ||||||||||| || || |||||
Sbjct 1915242 TTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTCTCCAACG 1915183
Query 50525 AGTTGATTTCGCGCGACGAAGGAATGCACACAGACTTTGCGTGTTTGTACTACAATACGC 50584
|| | || || || ||||| || ||||||| |||||||| ||| || | | |||
Sbjct 1915182 AGCTCATCTCCCGAGACGAGGGTCTGCACACGGACTTTGCCTGTCTGCTGTTCT---CGC 1915126
Query 50585 GCGTAAATGAAAAATTATCATACGAAACAATTTT---GGACATGTTCAAAGAAGCCGTCG 50641
| | || || | | | | | ||| | |||| || | || ||||| |
Sbjct 1915125 ACCTC---GAGAACCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTG 1915069
Query 50642 ACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTGGCATTGTTGGGCATGAACGCAG 50701
|||||| | ||||| | || ||||| | ||| | || |||||||||||||
Sbjct 1915068 GCATCGAGCAGGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCATGAACGCCA 1915009
Query 50702 ACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCAGCTGGGACAAC 50761
| | |||||| |||||||||||||||| || ||| | || || || || ||| |
Sbjct 1915008 AGCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGGCTGCTGGTGGCCCTCGGAAACT 1914949
Query 50762 CGAAATACTATAA-TGCACGTAACCCCTTTCCGTTTATGAATAACATATCGTTGGAGGGC 50820
| || ||| || | ||| |||||||| || ||| | ||||| ||| ||| |||
Sbjct 1914948 CCAAGGTCTACAACTCCAC-CAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGC 1914890
Query 50821 AAAACAAACTTTTTCGA 50837
|| || ||||| |||||
Sbjct 1914889 AAGACCAACTTCTTCGA 1914873
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507014152830480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |