Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq10 84.2 1e-11 >seq10 Length=888286 Score = 84.2 bits (92), Expect = 1e-11 Identities = 134/185 (72%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 71416 ACGGTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCC 71475 |||||||| | ||||||| |||||||||||||||||||| |||||||| || || || Sbjct 502078 ACGGTCATACGCGAGGGAATGGCGTGGGGGTTGATGATGATATCGGGCACGACACCCTC- 502136 Query 71476 TTGTCG--AAGGGCATGTCCTCCTGGGT-CAGGACAGCTCCGCATGTCCCCTTTTGCGCC 71532 | || || ||||||||||| || | | | || | || || ||||| || || Sbjct 502137 -GGCCGAAAACGGCATGTCCTCGTGTCTGTAAGTCA-CACCAATGGTACCCTTCTG-TCC 502193 Query 71533 GTGA-ATGACGCAAACTTGTCGCCCATCTCTGGGTGCCTGGGGGTCCTCAGCCTCACCTT 71591 |||| || ||||||||||| || |||| ||| | | | ||| | || | |||||| Sbjct 502194 GTGACGCGAGGCAAACTTGTCTCCAATCTGGGGGATCTTTGTGGTTCGCATTCGCACCTT 502253 Query 71592 GACGA 71596 ||||| Sbjct 502254 GACGA 502258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764638980856