Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 109 5e-19
>seq3
Length=2682169
Score = 109 bits (120), Expect = 5e-19
Identities = 345/529 (65%), Gaps = 37/529 (7%)
Strand=Plus/Plus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| ||| ||| || || || || || || |||||||| | || || ||||| |
Sbjct 1914851 CTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTC 1914910
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | | |||| | |||| || || | | | || |||
Sbjct 1914911 CATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGAGGGCCACCAGCAG 1914970
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
|| || ||||||||||| ||||| | ||||||| | ||| | |||||||||| || |
Sbjct 1914971 CCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTG-GCGTTCATGCCCAGCAGAC 1915029
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878
|| || | || | ||| | ||| |||| || ||| | || || || |||| || |
Sbjct 1915030 CGCAGGGGAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGT 1915089
Query 119879 ACTCAACACCTTGGTCTTGGAGAGCTTGTTCT----TTTCGGGAATATATTTATTGTAGT 119934
||| ||| | |||||||| || ||||| | || ||| |
Sbjct 1915090 CCTCGACA--ATCTTCTTGGAGGGCCGGTTCTCGAGGTGCGAGAACA------------- 1915134
Query 119935 ATAGACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAG 119994
||||| |||||||| ||||| || || ||||||| ||| ||||| |||||| | | |
Sbjct 1915135 GCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGG 1915194
Query 119995 TCAAGCCGGGTA-GAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTA 120053
||| |||||| | ||| ||| ||| |||| || |||| | |||||
Sbjct 1915195 TCAGGCCGGGCATGAG-ACCTCGCTTC------TTGAGCCAGAAGATGGAGGCAAACGAG 1915247
Query 120054 CCAGaaaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCA 120113
|| || ||||||| ||| || ||| ||||| || | | || ||| | || |||
Sbjct 1915248 CCGGAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTG--- 1915304
Query 120114 GATTGATTTTC---GATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGA 120159
|| | | || |||||| || | ||||| | ||||||| |||||
Sbjct 1915305 GACTCGTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGA 1915353
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662166652080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |