Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 109 5e-19 >seq3 Length=2682169 Score = 109 bits (120), Expect = 5e-19 Identities = 345/529 (65%), Gaps = 37/529 (7%) Strand=Plus/Plus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| ||| || || || || || || |||||||| | || || ||||| | Sbjct 1914851 CTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTC 1914910 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | | |||| | |||| || || | | | || ||| Sbjct 1914911 CATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGAGGGCCACCAGCAG 1914970 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 || || ||||||||||| ||||| | ||||||| | ||| | |||||||||| || | Sbjct 1914971 CCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTG-GCGTTCATGCCCAGCAGAC 1915029 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATGTCGACCGCTTCTACAA--ACAT 119878 || || | || | ||| | ||| |||| || ||| | || || || |||| || | Sbjct 1915030 CGCAGGGGAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGT 1915089 Query 119879 ACTCAACACCTTGGTCTTGGAGAGCTTGTTCT----TTTCGGGAATATATTTATTGTAGT 119934 ||| ||| | |||||||| || ||||| | || ||| | Sbjct 1915090 CCTCGACA--ATCTTCTTGGAGGGCCGGTTCTCGAGGTGCGAGAACA------------- 1915134 Query 119935 ATAGACAAGCAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAG 119994 ||||| |||||||| ||||| || || ||||||| ||| ||||| |||||| | | | Sbjct 1915135 GCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGG 1915194 Query 119995 TCAAGCCGGGTA-GAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTA 120053 ||| |||||| | ||| ||| ||| |||| || |||| | ||||| Sbjct 1915195 TCAGGCCGGGCATGAG-ACCTCGCTTC------TTGAGCCAGAAGATGGAGGCAAACGAG 1915247 Query 120054 CCAGaaaaaaaGACGCCTTCGACGATAGCAAAAGCGACCATGCGTTCGGCGAATGTGGCA 120113 || || ||||||| ||| || ||| ||||| || | | || ||| | || ||| Sbjct 1915248 CCGGAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTG--- 1915304 Query 120114 GATTGATTTTC---GATCCATTTTTGAGCCCAAGCCGCCTTCTGCTTGA 120159 || | | || |||||| || | ||||| | ||||||| ||||| Sbjct 1915305 GACTCGTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGA 1915353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478662166652080