Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 280 4e-70 seq5 111 4e-19 >seq2 Length=2949780 Score = 280 bits (310), Expect = 4e-70 Identities = 1153/1789 (64%), Gaps = 52/1789 (3%) Strand=Plus/Minus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459 ||||| ||||| | | ||||| || |||| |||| ||| ||| | || ||| Sbjct 80649 AAGACTCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCCGTTGCTGAGAGACCTCAG 80590 Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519 || ||| | ||||| || || | |||||||| || || ||| || || || Sbjct 80589 CAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGACATTGCCCGAGCTATCGAG 80530 Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576 || || || || | | || ||| ||| ||||| || || | || || ||||||| Sbjct 80529 ACCTACAA-CTAC-ATGT-CTCAGAAGTACTTCACCCATGCTTCTCCCACCCTGTACAAC 80473 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || || || | | || |||||||| || || || || | || ||||||||||| ||| Sbjct 80472 GCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCAACATGAAGGACGACTCC 80413 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 ||||| || |||| ||||| || |||| ||||||||| ||||||||| || || || Sbjct 80412 ATCGACGGCATCTACGACACTCTCAAGACTTGTGCTCTCATTTCCAAGTCCGCTGGAGGC 80353 Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGG 363754 |||||| | || |||||||| | || || || | | ||||| ||| || || | Sbjct 80352 ATTGGTCTGTCCATCCACAACATCCGAGCTACCGG-CTCCTACAT-CGCTGGAACCAACG 80295 Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814 || ||| || || | || |||||||| || |||| |||| || || | ||||||| Sbjct 80294 GAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAACACCGCTCGATACGTCG 80235 Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874 ||||||| || ||||| || || ||||| ||||| || ||||| || | || Sbjct 80234 ACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGACG 80175 Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934 | | || ||||| ||||| || || ||| || || ||||| | || || || | Sbjct 80174 ACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAGCCCGAG 80115 Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994 |||||||| || || ||| | | |||| || ||| |||| || ||| ||| | | Sbjct 80114 ATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGAGTCGAG-CAGA-ACGC 80057 Query 363995 --ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052 | ||| | ||| | ||||| |||| ||||| || ||| || || | || ||||| Sbjct 80056 CGAGTGGACCCTCATGTGCCCCAACGAGTGTCCCGGCCTTGATGACGTCTACGGCGACGA 79997 Query 364053 CTATGTTGCT-CTATACGAAAAGTATGAATCGGAGGGAA-AGGCTCGTAAGACAATTCCC 364110 | | || || ||||| |||| || |||||| |||| || || || ||| Sbjct 79996 GT-TCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCC 79939 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || |||||||| |||| ||| |||| | |||| ||| | || | |||| ||| Sbjct 79938 GCCCAGAAGCTGTGGTACCACATTCTGGACTGTCAGACCGAGTCCGGCAACCCCTTCATG 79879 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| || || |||||||| |||||||||||| || |||| ||||| || || | Sbjct 79878 CTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTGGGTACTATCAAGTCG 79819 Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290 |||||| || ||||||| | || ||| | |||| |||||| ||||| || ||| Sbjct 79818 TCCAACCTGTGCTGCGAGATTGTCGAGTACTCGTCTCCTGACGAGGTGGCCGTCTGCAAC 79759 Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338 || || || || ||||| || | ||||| | ||| | || || | ||| Sbjct 79758 CTGGCCTCCATTGCGCTGCCTACTTTTGTCACTCGAGACGAGACCAACTCGTTCTACGAC 79699 Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 | || | || | || | || | | || | | | || ||| || | |||| Sbjct 79698 TTCAAGAAGCTGCACGATATTGCCAAGGTGATTGTGC--GAAACCTCAACGCCATCATCG 79641 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || || || || || | || || ||| || || || ||||| || || || |||| Sbjct 79640 ACCGAAACTACTACCCCGTCCCCGAGGCCAAGAAGTCCAACATGCGACACCGACCCATTG 79581 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516 ||| ||||| ||||| || |||||| ||| ||| ||| | | ||||| || Sbjct 79580 CTCTGGGTGTCCAGGGTCTGGCTGACACTTTCATGGCCCTCCGACTTCCCTTTGAGTCCG 79521 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 || || || || | ||||||| || || || || | || | | Sbjct 79520 AGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCCGTTGAGG 79461 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 | || | || |||| | || ||| || | |||| || ||| | Sbjct 79460 CCTCCTACGAGATGGCCCTTGAGGACGGCGCCTACGAGACCTTCCAGGGCTCTCCTGCCT 79401 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | |||| | | ||||||||||| ||||| || || || || | | ||| | |||| Sbjct 79400 CCAAGGGTGACCTGCAGTTTGATCTGTGGAACGTGACTCCCTCCGAGCTCTGGGAGTGGG 79341 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 | || |||| | | |||| || | || ||||| || | || |||| Sbjct 79340 ACGATCTCAAGGCCAAGATCATGAAGACCGGAATGCGAAACTCGCTGCTGGTGGCCCCCA 79281 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 ||||||| || || || | ||||| ||||| ||||||||| ||||| || | || Sbjct 79280 TGCCCACCGCCTCCACCTCGCAGATTCTCGGCTTCAACGAGTGTTTCGAGCCCTACACCT 79221 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| |||| || || || || ||| | || || || | | | || || | || Sbjct 79220 CCAACATTTACTCTCGACGAGTGCTTGCTGGCGAGTTCCAGATTGTCAACCCCTGGCTGC 79161 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 ||||||| || || ||| |||||| ||| | |||||||||| ||| | |||| Sbjct 79160 TCAAGGACCTGGTTGAGGTCGGACTGTGGAATGAGACCATGAAGAACCGAATCGTGGCCG 79101 Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAA 364994 || || || ||||||||||| ||| || |||| ||||| ||| | ||||| Sbjct 79100 ACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC--AAGGACCTGTACAA 79043 Query 364995 AACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCGCG 365047 ||||| ||||| ||||| | ||||| |||| || ||||| | |||||| | Sbjct 79042 GACCGTGTGGGAGATTTCGCAGAAGCGAA---TCATCGAGATGGCTGCTGACCGATCCCC 78986 Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107 | | || | | ||| |||||| | ||| | ||| | | || ||| | || Sbjct 78985 CTTCATTGACCAGTC----CCAGTCTCTCAACATCCACATCAAGGACCCCACCATGGGCA 78930 Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||| || |||||||| |||||||| ||||| ||||| ||||| || Sbjct 78929 AGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGG 78881 >seq5 Length=1963011 Score = 111 bits (122), Expect = 4e-19 Identities = 237/354 (67%), Gaps = 0/354 (0%) Strand=Plus/Plus Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690 || |||||||| || |||| || || || |||| ||||| | || || || | || Sbjct 1037112 GACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATCTCGAAAACCGCC 1037171 Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACA 363750 ||||| || ||| | |||||||| | || || || | | ||| || | Sbjct 1037172 GGCGGCATCGGTCTGCATATCCACAACATCCGAGCCAAGGGCGCTATTATTACAGGGTCT 1037231 Query 363751 GGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810 ||| || | ||| | || |||||||| | ||||| |||| || ||||||||| Sbjct 1037232 CAAGGAAGATCCAGTGGCATCGTGCCCATGCTCAGAGTGTTCAACAACACCGCGAGGTAC 1037291 Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870 || ||||||||||| ||||| || |||||||| || ||||| ||||| || Sbjct 1037292 GTGGACCAGGGTGGGAACAAGCGTCCCGGCGCGTTTGCCATCTATCTGGAGCCGTGGCAC 1037351 Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930 ||||| ||| | || ||||| | || ||||||||| ||| || || | || Sbjct 1037352 GCCGACATTCTCGATTTTCTCAATCTGCGGAAAAACCATGGAGCCGAAGAGAACAGAGCC 1037411 Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 || || |||||||| ||| | ||||| | |||| || |||||||| || ||| Sbjct 1037412 CGGGACCTGTTCTACGCATTGTGGGTGCCCGACCTGTTCATGAAGCGGGTCGAG 1037465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352948730498