Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq2 280 4e-70
seq5 111 4e-19
>seq2
Length=2949780
Score = 280 bits (310), Expect = 4e-70
Identities = 1153/1789 (64%), Gaps = 52/1789 (3%)
Strand=Plus/Minus
Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAG 363459
||||| ||||| | | ||||| || |||| |||| ||| ||| | || |||
Sbjct 80649 AAGACTCTGGAGCGAGCATACCTGCTGCGAGTCAACGGTGCCGTTGCTGAGAGACCTCAG 80590
Query 363460 CATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAA 363519
|| ||| | ||||| || || | |||||||| || || ||| || || ||
Sbjct 80589 CAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGACATTGCCCGAGCTATCGAG 80530
Query 363520 ACATATAAGCTTCTAAGTGCTCGT--GTA-TTCACGCACGCCACGCCAACAATGTACAAT 363576
|| || || || | | || ||| ||| ||||| || || | || || |||||||
Sbjct 80529 ACCTACAA-CTAC-ATGT-CTCAGAAGTACTTCACCCATGCTTCTCCCACCCTGTACAAC 80473
Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636
|| || || | | || |||||||| || || || || | || ||||||||||| |||
Sbjct 80472 GCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCAACATGAAGGACGACTCC 80413
Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696
||||| || |||| ||||| || |||| ||||||||| ||||||||| || || ||
Sbjct 80412 ATCGACGGCATCTACGACACTCTCAAGACTTGTGCTCTCATTTCCAAGTCCGCTGGAGGC 80353
Query 363697 ATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC-GGCACAGGGG 363754
|||||| | || |||||||| | || || || | | ||||| ||| || || |
Sbjct 80352 ATTGGTCTGTCCATCCACAACATCCGAGCTACCGG-CTCCTACAT-CGCTGGAACCAACG 80295
Query 363755 GATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCG 363814
|| ||| || || | || |||||||| || |||| |||| || || | |||||||
Sbjct 80294 GAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAACACCGCTCGATACGTCG 80235
Query 363815 ACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCG 363874
||||||| || ||||| || || ||||| ||||| || ||||| || | ||
Sbjct 80234 ACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGACG 80175
Query 363875 ATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTG 363934
| | || ||||| ||||| || || ||| || || ||||| | || || || |
Sbjct 80174 ACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAGCCCGAG 80115
Query 363935 ATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGA 363994
|||||||| || || ||| | | |||| || ||| |||| || ||| ||| | |
Sbjct 80114 ATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGAGTCGAG-CAGA-ACGC 80057
Query 363995 --ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGA 364052
| ||| | ||| | ||||| |||| ||||| || ||| || || | || |||||
Sbjct 80056 CGAGTGGACCCTCATGTGCCCCAACGAGTGTCCCGGCCTTGATGACGTCTACGGCGACGA 79997
Query 364053 CTATGTTGCT-CTATACGAAAAGTATGAATCGGAGGGAA-AGGCTCGTAAGACAATTCCC 364110
| | || || ||||| |||| || |||||| |||| || || || |||
Sbjct 79996 GT-TCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGAGGC-CGACGAACCATCCCC 79939
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| |||||||| |||| ||| |||| | |||| ||| | || | |||| |||
Sbjct 79938 GCCCAGAAGCTGTGGTACCACATTCTGGACTGTCAGACCGAGTCCGGCAACCCCTTCATG 79879
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||| || || |||||||| |||||||||||| || |||| ||||| || || |
Sbjct 79878 CTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGAACCTGGGTACTATCAAGTCG 79819
Query 364231 AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAAC 364290
|||||| || ||||||| | || ||| | |||| |||||| ||||| || |||
Sbjct 79818 TCCAACCTGTGCTGCGAGATTGTCGAGTACTCGTCTCCTGACGAGGTGGCCGTCTGCAAC 79759
Query 364291 CTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGGTAC-------TTTT--GAC 364338
|| || || || ||||| || | ||||| | ||| | || || | |||
Sbjct 79758 CTGGCCTCCATTGCGCTGCCTACTTTTGTCACTCGAGACGAGACCAACTCGTTCTACGAC 79699
Query 364339 CACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
| || | || | || | || | | || | | | || ||| || | ||||
Sbjct 79698 TTCAAGAAGCTGCACGATATTGCCAAGGTGATTGTGC--GAAACCTCAACGCCATCATCG 79641
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| || || || || | || || ||| || || || ||||| || || || ||||
Sbjct 79640 ACCGAAACTACTACCCCGTCCCCGAGGCCAAGAAGTCCAACATGCGACACCGACCCATTG 79581
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516
||| ||||| ||||| || |||||| ||| ||| ||| | | ||||| ||
Sbjct 79580 CTCTGGGTGTCCAGGGTCTGGCTGACACTTTCATGGCCCTCCGACTTCCCTTTGAGTCCG 79521
Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576
|| || || || | ||||||| || || || || | || | |
Sbjct 79520 AGGAGGCCAAGAAGCTCAACATCCAGATCTTCGAGACCATCTACCACGGAGCCGTTGAGG 79461
Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636
| || | || |||| | || ||| || | |||| || ||| |
Sbjct 79460 CCTCCTACGAGATGGCCCTTGAGGACGGCGCCTACGAGACCTTCCAGGGCTCTCCTGCCT 79401
Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696
| |||| | | ||||||||||| ||||| || || || || | | ||| | ||||
Sbjct 79400 CCAAGGGTGACCTGCAGTTTGATCTGTGGAACGTGACTCCCTCCGAGCTCTGGGAGTGGG 79341
Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756
| || |||| | | |||| || | || ||||| || | || ||||
Sbjct 79340 ACGATCTCAAGGCCAAGATCATGAAGACCGGAATGCGAAACTCGCTGCTGGTGGCCCCCA 79281
Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816
||||||| || || || | ||||| ||||| ||||||||| ||||| || | ||
Sbjct 79280 TGCCCACCGCCTCCACCTCGCAGATTCTCGGCTTCAACGAGTGTTTCGAGCCCTACACCT 79221
Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876
||| |||| || || || || ||| | || || || | | | || || | ||
Sbjct 79220 CCAACATTTACTCTCGACGAGTGCTTGCTGGCGAGTTCCAGATTGTCAACCCCTGGCTGC 79161
Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936
||||||| || || ||| |||||| ||| | |||||||||| ||| | ||||
Sbjct 79160 TCAAGGACCTGGTTGAGGTCGGACTGTGGAATGAGACCATGAAGAACCGAATCGTGGCCG 79101
Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGAT-TTCCAGAAGATCTGAAGCCTATTTACAA 364994
|| || || ||||||||||| ||| || |||| ||||| ||| | |||||
Sbjct 79100 ACAACGGATCCGTGCAGAACATCCCCAACATCCCCCAGGAGATC--AAGGACCTGTACAA 79043
Query 364995 AACCGTATGGGAAATTTC---CATGCGAACTCTCATTGATATGGC----GGCCGATCGCG 365047
||||| ||||| ||||| | ||||| |||| || ||||| | |||||| |
Sbjct 79042 GACCGTGTGGGAGATTTCGCAGAAGCGAA---TCATCGAGATGGCTGCTGACCGATCCCC 78986
Query 365048 GTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCA 365107
| | || | | ||| |||||| | ||| | ||| | | || ||| | ||
Sbjct 78985 CTTCATTGACCAGTC----CCAGTCTCTCAACATCCACATCAAGGACCCCACCATGGGCA 78930
Query 365108 AGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||| || |||||||| |||||||| ||||| ||||| ||||| ||
Sbjct 78929 AGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAAGACCGG 78881
>seq5
Length=1963011
Score = 111 bits (122), Expect = 4e-19
Identities = 237/354 (67%), Gaps = 0/354 (0%)
Strand=Plus/Plus
Query 363631 GATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCA 363690
|| |||||||| || |||| || || || |||| ||||| | || || || | ||
Sbjct 1037112 GACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAAATCTCGAAAACCGCC 1037171
Query 363691 GGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCACA 363750
||||| || ||| | |||||||| | || || || | | ||| || |
Sbjct 1037172 GGCGGCATCGGTCTGCATATCCACAACATCCGAGCCAAGGGCGCTATTATTACAGGGTCT 1037231
Query 363751 GGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTAC 363810
||| || | ||| | || |||||||| | ||||| |||| || |||||||||
Sbjct 1037232 CAAGGAAGATCCAGTGGCATCGTGCCCATGCTCAGAGTGTTCAACAACACCGCGAGGTAC 1037291
Query 363811 GTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCAT 363870
|| ||||||||||| ||||| || |||||||| || ||||| ||||| ||
Sbjct 1037292 GTGGACCAGGGTGGGAACAAGCGTCCCGGCGCGTTTGCCATCTATCTGGAGCCGTGGCAC 1037351
Query 363871 GCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCA 363930
||||| ||| | || ||||| | || ||||||||| ||| || || | ||
Sbjct 1037352 GCCGACATTCTCGATTTTCTCAATCTGCGGAAAAACCATGGAGCCGAAGAGAACAGAGCC 1037411
Query 363931 CGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
|| || |||||||| ||| | ||||| | |||| || |||||||| || |||
Sbjct 1037412 CGGGACCTGTTCTACGCATTGTGGGTGCCCGACCTGTTCATGAAGCGGGTCGAG 1037465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352948730498
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |