Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 167 2e-36 seq5 129 6e-25 seq2 123 2e-23 seq7 116 3e-21 >seq3 Length=2682169 Score = 167 bits (184), Expect = 2e-36 Identities = 337/492 (68%), Gaps = 11/492 (2%) Strand=Plus/Minus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGT 46158 ||||| ||||||||||| | ||||||||| | | | | || || | |||||| Sbjct 1915348 AAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCCACCTTTGGCGAGCGA 1915289 Query 46159 ATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTT 46218 | | |||||||| ||||||||| ||||||| || ||| |||||| ||||||| Sbjct 1915288 CTCATTGCCTTTGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATCTTC 1915229 Query 46219 TACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCG 46277 | |||| || | ||| | |||||||||||||||| || ||||||||| || || || Sbjct 1915228 TGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCG 1915170 Query 46278 CGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACTCGCGTGCACGACAA 46337 |||||||| ||||| ||||||||||| || ||| || | ||||| | ||| || Sbjct 1915169 AGACGAGGGTCTGCACACGGACTTTGCCTG--TCTGCTGT---TCTCGC-ACCTCGAGAA 1915116 Query 46338 GCTTGCGCCCGA-CACCGTGCTGAG--CATGTTCAAGGAGGCGGTGGCCATTGAGAAGGA 46394 | | || | | || ||| | || | ||||| || | ||| ||| |||| Sbjct 1915115 CCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGCATCGAGCAGGA 1915056 Query 46395 GTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGA 46454 ||| | || | ||| || ||| | ||||||||||||||||| || |||||| | Sbjct 1915055 GTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCATGAACGCCAAGCTCATGTGCCA 1914996 Query 46455 CTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCA 46514 ||||| |||||||| || ||||| ||||| ||| || | | ||| | | Sbjct 1914995 GTACATTGAGTTTGTGGCCGACCGGCTGCTGGTGGCCCTCGGAAACTCCAAGGTCTACAA 1914936 Query 46515 CGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTT 46574 | | ||| || || || || ||| | |||||||| |||| ||||| || || || || Sbjct 1914935 CTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTT 1914876 Query 46575 CGAAAAGCGCGT 46586 ||| ||||| || Sbjct 1914875 CGAGAAGCGGGT 1914864 >seq5 Length=1963011 Score = 129 bits (142), Expect = 6e-25 Identities = 559/864 (65%), Gaps = 29/864 (3%) Strand=Plus/Minus Query 145631 GACGCCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCA 145689 ||||||| || || || ||| ||| || |||| || ||| || ||||| || | ||| Sbjct 1037779 GACGCCAGGTTGCACACCGCCACCTCTTCCGGCGACGA-GTACTGGACGATTTCCGTGCA 1037721 Query 145690 CAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGCG 145747 || ||| |||||||||||||||| || ||||| || ||||| | |||||| | Sbjct 1037720 CAGGTTGGACGATTTGATGGTTCCCAGGTTCTGCTGGTTGGACTTTGC--GTTGCAGCTG 1037663 Query 145748 TCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGC 145807 |||||||| |||||| | || || || || || | ||| || || || | | Sbjct 1037662 TCCTTGTACAGCATGAAGGGGCCTCCGGTTTCGATCTGGCTCGTCAGAATCGCCTTGAAC 1037603 Query 145808 AAGTCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGC 145867 | ||||| || | ||| | ||| ||||| || ||||| | | ||| Sbjct 1037602 AGCTCCTGGGCGTTGATCTGGGCGTTGTACAGGCCCCTTTTCTCGTACTCCTCGTACTTT 1037543 Query 145868 TCCTCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGC 145927 | |||||| ||| || | || ||| || ||| ||| |||||||| | || | Sbjct 1037542 TGTTCAAACTCGGGGCCCCACACGTCTTCCAGTCCCGGAGCCTTCTTGGGACAGAACAAC 1037483 Query 145928 GACCA---TACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCG 145984 ||||| | |||| || | ||| |||| ||| |||| || |||||||||| ||| Sbjct 1037482 GACCACTTTTCGCCCC--GC-TCGACCCGCTTCATGAACAGGTCGGGCACCCACAATGCG 1037426 Query 145985 TACATCAAGTCGCGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACA 146044 || | || ||| || ||| || || || || || |||| | || ||| || | | Sbjct 1037425 TAGAACAGGTCCCGGGCTCTGTTCTCTTCGGCTCCATGGTTTTTCCGCAGATTGAGAAAA 1037366 Query 146045 CTATAGA-TGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTTG-- 146101 | ||| |||| ||||||||||| || | ||||| ||| | || || || ||| Sbjct 1037365 -TCGAGAATGTCGGCGTGCCACGGCTCCAGATAGATGGCAAACGCGCCGGGACGCTTGTT 1037307 Query 146102 -CCACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCC 146160 |||||||||||||||| | | ||||||| || || | | ||||||| ||| ||| Sbjct 1037306 CCCACCCTGGTCCACGTACCTCGCGGTGTTGTTGAACACTCTGAGCATGGGCACGATGCC 1037247 Query 146161 GCTGGCTACGCCGTTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATT 146220 |||| | || | | | || | | ||| || || | | || | || Sbjct 1037246 ACTGGATCTTCCTTGAGACCCTGTAATAATAGCGCCCTTGGCTCGGATGTTGTGGATATG 1037187 Query 146221 CACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCC--GAGCGTCTCGTAG 146278 || |||| |||||| || || || || ||||| || | ||| || |||||| Sbjct 1037186 CAGACCGATGCCGCCGGCGGTTTTCGAGAT--TTGCGCACACGTCTTGAGGGTATCGTAG 1037129 Query 146279 ATGCCGTCAATGCTAT-CGCTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCAT 146337 || ||||| ||| | ||| | ||| | | |||||| ||||| ||| ||| || Sbjct 1037128 ATTCCGTCGATGGAGTCCGCAGC-CATGGCCACCAGAAAACACGACGACAGCTGGCCCTG 1037070 Query 146338 CGGCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCAT 146397 || || || || ||| | || || || ||||| ||| || | || | Sbjct 1037069 GGGGGTGCCTGCGTTGAAGAGGGTGGGAGAGGCATGCGTGAAC-TTGCGCAGCGACAGAG 1037011 Query 146398 CCG-ATACGTTTCGATAGCGTCTTG--AATGTCGTCGCCATGAATGCCCAAAGCGACGCG 146454 | | ||||| ||| ||| |||| |||||||| || || || |||| ||| ||||| Sbjct 1037010 CGGTGTACGTGTCG--AGCACCTTGGCGATGTCGTCTCCGTGGATCCCCAGAGCCACGCG 1036953 Query 146455 CATGAGCATGTGTTGGGGCCGCTC 146478 ||||||||||||||| || || || Sbjct 1036952 CATGAGCATGTGTTGAGGACGTTC 1036929 Score = 113 bits (124), Expect = 4e-20 Identities = 288/430 (67%), Gaps = 10/430 (2%) Strand=Plus/Minus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 || ||||| ||| |||||||||||||| ||| || |||| || | ||| |||||| || Sbjct 1038373 TGGTTGACCACCAGAAACTCGCCGGCCTGCACTCGCCGCAGGTAAATGTTGGACGTGTAG 1038314 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 || || || ||||||| | ||| ||||| || | ||| | ||||| |||||| ||| Sbjct 1038313 GGCTCGAAGCACTCGTTGTGGCCGAGGATCTGGGAGGTAGAAGCGGTAGGCATGGGAGCC 1038254 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 |||| | || ||||||| ||| ||||| || | ||| ||| |||| ||| Sbjct 1038253 ACCAGCAGCGAGTTGCGCATGCCATGCTTGGCGAGATTGGTCTTGAGCAGGGCCCAGTCC 1038194 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 || || | || || || ||||| || |||||| || |||| |||||| || Sbjct 1038193 CAGAGATCCGAGGGAGTCTTGTTCCACAGATCAAACTGCAGAAGACCCTTGCTGGCAGGA 1038134 Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGCAACTCGCCTC-C 145351 ||||| | | | ||| | | ||| |||| || || ||||| ||| || | Sbjct 1038133 CTGCCCTCGTATG-ACTCATAGGGTCCC-AGTTCTGCTGCCAGCTCAATGGACGCTTCGC 1038076 Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAG--CAGCATCGCTTCATCGC 145409 || || || ||||| |||||| || | ||| || | ||| |||||| || Sbjct 1038075 AG-GCAGCGTGGTAAATGGTCTCGAAGATGAGAACGTTCAGTTCCGCA--GCTTCAGGGC 1038019 Query 145410 TCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGA 145469 | || || |||||||||||| | ||| | || || || ||||| | |||||| | | Sbjct 1038018 TATCATAGGGCATGCGCAGCTTCATAAACACGTCTGCCAGACCCTGCACGCCCACGGCAA 1037959 Query 145470 TGGGCCGATG 145479 | || ||||| Sbjct 1037958 TCGGACGATG 1037949 >seq2 Length=2949780 Score = 123 bits (136), Expect = 2e-23 Identities = 720/1134 (63%), Gaps = 43/1134 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||| | ||| |||||||| || | ||| || || | || | ||| || ||| |||| Sbjct 79172 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGC 79231 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || ||| ||||||| ||| || || || | ||| | |||||||||||| |||||| Sbjct 79232 TCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCACC 79291 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAG--CGTACCCCAATCCC 145235 | | || || |||| ||| |||| |||| | |||| || ||| |||| |||| Sbjct 79292 AGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGAGATCGT--CCCACTCCC 79349 Query 145236 ATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGC 145295 | ||| | || |||||| ||||| || |||||| |||| | ||| || Sbjct 79350 AGAGCTCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGGTCACCCTTGGAGGCAGGAG 79409 Query 145296 TGCCTTGAAAGGAACTGTA----ACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCC 145351 ||| || |||| ||| | || |||| ||| | |||| | ||||| Sbjct 79410 AGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAG----GGCCATCTCGTAGGAGGCCTCA 79465 Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTC 145411 | || ||| || || |||||| || || |||||||| | | || || ||| | Sbjct 79466 ACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGAC 79525 Query 145412 TCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATG 145471 || | || | || || | |||| || || || ||||| | |||| | ||| Sbjct 79526 TCAAAGGGAAGTCGGAGGGCCATGAAAGTGTCAGCCAGACCCTGGACACCCAGAGCAATG 79585 Query 145472 GGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531 || || ||| ||||||| | || | ||| || || || || |||||||| Sbjct 79586 GGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGGACGGGGTAGTAGTTTCGGTCGATG 79645 Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC--AA 145589 || || | ||||||||| | ||||| | ||| | ||| ||| | ||||| | Sbjct 79646 ATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTAG 79705 Query 145590 ACCGA----GCCTCGTCAACGA-CCACACAGCTATTGACGGCGATCGACGCCAAATTACA 145644 | ||| | |||||| ||| ||| | || | || || || |||| || || Sbjct 79706 AACGAGTTGGTCTCGTC-TCGAGTGACAAAAGTAGGCAGCGCAATGGAGGCCAGGTTGCA 79764 Query 145645 AACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATT 145703 || ||| ||| || || | || ||| | || |||||| ||||| ||| | | Sbjct 79765 GACGGCCACCTCGTCAGGAGACG-AGTACTCGACAATCTCGCAGCACAGGTTGGACGACT 79823 Query 145704 TGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGCGTCCTTGTAGAGCAT 145761 |||| || ||||| || | ||| || ||||| | |||||| | ||||||||||||||| Sbjct 79824 TGATAGTACCCAGGTTCTTCTGGTTGGACTTT--CGGTTGCAGGAGTCCTTGTAGAGCAT 79881 Query 145762 GTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGT---GCAAGTCCTGCGC 145818 | | || ||| | ||| ||| ||| | || ||| || | ||| || Sbjct 79882 GAAGGGGTTGCCGGACTCGGTCTGACAGTCC---AGAATGTGGTACCACAGCTTCTGGGC 79938 Query 145819 ACGCACCTGCT--GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAAC 145876 | | || | | || |||||||| | ||||| | | ||| |||| || ||| Sbjct 79939 GGGGA--TGGTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAAC 79996 Query 145877 GCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACG 145936 || |||||| || ||||||||||||| |||||| ||||| || | ||| || Sbjct 79997 TCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCACTCG 80056 Query 145937 CCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCG 145996 |||| | ||| |||||||| |||| || || | ||| || || | || || Sbjct 80057 GCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATCT 80116 Query 145997 CGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCA-CACT-ATAGATGT 146054 || ||| ||||| | || || ||| ||| | ||| ||| ||| || Sbjct 80117 CGGGCTCGAATCTCCTCCTTA-CCGTGGTTC-TTTCGCAGCTCGCAGAACTCGAAGACGT 80174 Query 146055 CCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGT 146111 | ||||||| || || | || | ||| | |||||| ||| ||||| ||||||| Sbjct 80175 CGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGT 80234 Query 146112 CCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGG 146165 | |||| || | ||||||| | || |||| ||||||| ||| ||| ||| Sbjct 80235 CGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGG 80288 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | |||||| || | || | || |||||||| || |||||||| || Sbjct 2456743 CCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2456684 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 2456683 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGA 2456624 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 2456623 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 2456564 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCA 131233 |||| ||| | ||| || || || || || || || || || |||| Sbjct 2456563 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518 >seq7 Length=1109975 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | ||| | || |||||||| || |||||||| || Sbjct 1062782 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1062723 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| |||||||| || ||| |||| | |||||||||||||| || Sbjct 1062722 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1062663 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | || | || |||| ||||| | Sbjct 1062662 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1062603 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | || |||||||| || || || || ||||||||||| Sbjct 1062602 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1062556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012569893760