Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq2 183 4e-41
seq3 174 2e-38
seq5 105 8e-18
>seq2
Length=2949780
Score = 183 bits (202), Expect = 4e-41
Identities = 462/700 (66%), Gaps = 2/700 (0%)
Strand=Plus/Plus
Query 62995 GAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCA 63054
||||||||| || | || | || || || ||||| || | || ||||| | | |||
Sbjct 79993 GAACTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCA 80052
Query 63055 CTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAG 63114
||| ||| | || ||||| | ||| || || || || ||||| ||||| | || ||
Sbjct 80053 CTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAG 80112
Query 63115 ATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAAT 63174
||||| || || | ||||| || || |||||| || ||| |||| | | |
Sbjct 80113 ATCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGAC 80172
Query 63175 ATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTG 63234
|| ||||| || |||| ||| ||||| | |||| || || ||||| || |||||
Sbjct 80173 GTCGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTG 80232
Query 63235 ATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGT 63294
|| | ||||| ||||||||| || || |||| || ||| || | ||||| ||||| ||
Sbjct 80233 GTCGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGT 80292
Query 63295 ACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTAT 63354
|| ||||| || | ||| ||| || | || || || || || || ||||| ||
Sbjct 80293 TCCGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAAT 80352
Query 63355 TCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTAT 63414
|| || || || || || | || || || | || || |||||||| || ||
Sbjct 80353 GCCTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGTAGATGCCGTCGAT 80412
Query 63415 ACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGC 63474
|| ||| ||||||| | || ||||| ||||| ||| | | || || ||
Sbjct 80413 GGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGC 80472
Query 63475 ATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAA-GTAGATTGTACGTCT 63533
|| | | ||| |||||||| || || || | || | ||| | |||| ||||| ||||
Sbjct 80473 GTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAG-TTGTAGGTCT 80531
Query 63534 CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 63593
| |||||| | | || || || || || || | || ||||| | ||| ||||
Sbjct 80532 CGATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCT 80591
Query 63594 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 63653
||||||| ||| | | ||| | | || || ||| | | |||| ||| || |
Sbjct 80592 GAGGTCTCTCAGCAACGGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651
Query 63654 AACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 63693
| ||||| |||||||| | ||||||| ||||| | |||
Sbjct 80652 AGCCAAAGTAGTTGTAGGTGAAGTCTCTGTCGTAGAGAAT 80691
>seq3
Length=2682169
Score = 174 bits (192), Expect = 2e-38
Identities = 398/597 (67%), Gaps = 8/597 (1%)
Strand=Plus/Plus
Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711
|||| || ||| || || || ||| ||||||||||||| || | ||||||||
Sbjct 1915131 AACAGCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 1915190
Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771
|| || || |||||||| || || ||||| || ||||| || ||||| ||||| || ||
Sbjct 1915191 AAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCG 1915250
Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CG 32828
|| || || || || || || || ||||||||||| |||| ||| ||| | || ||
Sbjct 1915251 GAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCG 1915310
Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888
||| |||||||| | ||||| ||||||||||| || | || || || |||||
Sbjct 1915311 TCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCG 1915370
Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948
|| || || || || ||| || || || || || | ||||| || |||| ||
Sbjct 1915371 ATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGC 1915430
Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008
|| ||||||| || ||||| || || || || || ||||||||||| | |||
Sbjct 1915431 GAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCC 1915490
Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068
|||| ||| || || |||| || || | | || || || || || |||||
Sbjct 1915491 TCGGGGGCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCC 1915550
Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT----AG 33124
||| ||||| || |||| || || || || | ||||| | |||| |
Sbjct 1915551 GAGGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTC-GTTGTTGAGCCG 1915609
Query 33125 TTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184
|| | ||| || || || || | ||| | ||| || | ||||| || || ||
Sbjct 1915610 GTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGC 1915669
Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241
||| ||||| || ||||| | |||||| || || || || || || || | |||||
Sbjct 1915670 CTCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 1915726
>seq5
Length=1963011
Score = 105 bits (116), Expect = 8e-18
Identities = 288/431 (67%), Gaps = 14/431 (3%)
Strand=Plus/Minus
Query 62991 GTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGA-CATTCATCCGGACACATCAAC 63049
|||| |||||| ||||| || | |||||||| ||| | ||| | ||||| | ||||
Sbjct 1037541 GTTCAAACTCGGGGCCCCACACGTCTTCCAGTCCCGGAGCCTTCTTG-GGACAGAACAAC 1037483
Query 63050 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63109
||||||| | || | || || || ||||| || || || || | ||| | ||
Sbjct 1037482 GACCACTTTTCGCCCCGCTCGACCCGCTTCATGAACAGGTCGGGCACCCACAATGCGTAG 1037423
Query 63110 AATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTT---AAGATCGAGGAAC 63166
|| || || | || ||| | || ||| ||| || ||||| |||| ||| ||
Sbjct 1037422 AACAGGTCCCGGGCTCTGTTCTCTTCGGCTCC---ATGGTTTTTCCGCAGATTGAGAAAA 1037366
Query 63167 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63226
| | ||| || | |||||||| |||| || ||||| | | || || || |||||
Sbjct 1037365 TCGAGAATGTCGGCGTGCCACGGCTCCAGATAGATGGCAAACGCGCCGGGACGCTTGTTC 1037306
Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286
|| ||||| || | ||| || |||||||| || | ||||| | ||| || | || |||
Sbjct 1037305 CCACCCTGGTCCACGTACCTCGCGGTGTTGTTGAACACTCTGAGCATGGGCACGATGCCA 1037246
Query 63287 TTGGATGTACCATTGGTCCCTGAGAT-ATAGCTTCCACTGGCACGAATATTACTAATTGA 63345
||||| | || | | ||||| || ||||| || |||| || || || ||
Sbjct 1037245 CTGGATCTTCCTTGAGACCCTGTAATAATAGC-GCCCTTGGCTCGGATGTTGTGGATATG 1037187
Query 63346 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCA-TCGT-TTTAACGTATCATAG 63403
||||| || || || || |||| |||||| |||||| ||| || | ||||| |||
Sbjct 1037186 CAGACCGATGCCGCCGGCGGTTTTCGAGATT--TGCGCACACGTCTTGAGGGTATCGTAG 1037129
Query 63404 ATGCCCTCTAT 63414
|| || || ||
Sbjct 1037128 ATTCCGTCGAT 1037118
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633631691104400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |