Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq3 197 2e-45
>seq3
Length=2682169
Score = 197 bits (218), Expect = 2e-45
Identities = 418/620 (67%), Gaps = 9/620 (1%)
Strand=Plus/Plus
Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151
|| |||||||| || || | ||| |||||||| || || | ||| ||| ||| || |
Sbjct 1915140 CAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 1915199
Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211
|| || | || ||||| ||||||||||| || || || ||||| || || |||||
Sbjct 1915200 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAG 1915259
Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT--TACT-G 93268
|| || |||||||| ||||| || | | || ||| |||| | ||| | | | |
Sbjct 1915260 ATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAA---GGTGGACTCGTCGTCG 1915316
Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328
|||||| || | ||||| ||||| || ||||| || || || | || ||||| |||
Sbjct 1915317 GAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCG 1915376
Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388
|| || ||||| |||||| | | || |||||||| ||||| | ||| || ||
Sbjct 1915377 TTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAG 1915436
Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448
|||| || |||| |||||||| || ||||| |||||||| || | || || | |
Sbjct 1915437 GTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGG 1915496
Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508
|||||| || ||||| | ||| || || || || ||||| || || || || ||
Sbjct 1915497 GCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCG 1915556
Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCC 93565
||||| || |||| | || || || ||| || | || ||| || |||
Sbjct 1915557 GCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCC 1915616
Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625
|| ||| | || || ||||||| ||| ||| | ||||| ||||| || || ||
Sbjct 1915617 CAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGCCTCGGCC 1915676
Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685
|| |||||||| | ||| || || || || || || || || | ||||| || ||
Sbjct 1915677 TTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGCCGGTGG 1915736
Query 93686 TTATCTTTTAGTAACGGCTC 93705
|| || || || | ||||||
Sbjct 1915737 TTCTCCTTGAGCAGCGGCTC 1915756
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860528530360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |