Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3 197 2e-45 >seq3 Length=2682169 Score = 197 bits (218), Expect = 2e-45 Identities = 418/620 (67%), Gaps = 9/620 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 || |||||||| || || | ||| |||||||| || || | ||| ||| ||| || | Sbjct 1915140 CAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGG 1915199 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | || ||||| ||||||||||| || || || ||||| || || ||||| Sbjct 1915200 CCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAG 1915259 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAAT--TACT-G 93268 || || |||||||| ||||| || | | || ||| |||| | ||| | | | | Sbjct 1915260 ATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAA---GGTGGACTCGTCGTCG 1915316 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 |||||| || | ||||| ||||| || ||||| || || || | || ||||| ||| Sbjct 1915317 GAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCG 1915376 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 || || ||||| |||||| | | || |||||||| ||||| | ||| || || Sbjct 1915377 TTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAG 1915436 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 |||| || |||| |||||||| || ||||| |||||||| || | || || | | Sbjct 1915437 GTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGG 1915496 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 |||||| || ||||| | ||| || || || || ||||| || || || || || Sbjct 1915497 GCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCG 1915556 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGC---TTATCC 93565 ||||| || |||| | || || || ||| || | || ||| || ||| Sbjct 1915557 GCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCC 1915616 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| | || || ||||||| ||| ||| | ||||| ||||| || || || Sbjct 1915617 CAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGCCTCGGCC 1915676 Query 93626 TTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGG 93685 || |||||||| | ||| || || || || || || || || | ||||| || || Sbjct 1915677 TTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGCCGGTGG 1915736 Query 93686 TTATCTTTTAGTAACGGCTC 93705 || || || || | |||||| Sbjct 1915737 TTCTCCTTGAGCAGCGGCTC 1915756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860528530360