Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq3 179 8e-40
seq1 147 4e-30
seq2 105 1e-17
seq9 84.2 4e-11
>seq3
Length=2682169
Score = 179 bits (198), Expect = 8e-40
Identities = 560/856 (65%), Gaps = 16/856 (2%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | |||||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 1914873 TCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1914932
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| ||||| ||||| | || || || || | | ||||| ||||||||||| |
Sbjct 1914933 GAGTTGTAGACCTTGGAGTTTCCGAGGGCCACCAGCAGCCGGTCGGCCACAAACTCAATG 1914992
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| | ||| || | | ||||||||| | || || || || | || || | |
Sbjct 1914993 TACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGACCGCAGGGGAGCGCGTCGGTCAGG 1915052
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCAC-CTGTGCCAGAGACAG 251801
|| |||| ||| || |||| ||||| | | | ||| || | | | | || |
Sbjct 1915053 AACTCCTGCTCGATGCCAACGGCCTCGACAATCACGTCCTCGACAATCTTCTTG-GAGGG 1915111
Query 251802 CTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCG 251861
| |||||| || | ||| |||| || | |||| | ||||||||||||||| ||
Sbjct 1915112 CCGGTTCTCGAGGTGCGAGAACAGCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCG 1915171
Query 251862 ACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAA 251921
||||| ||||||||| | |||||| ||||| | || || ||| ||||||||||
Sbjct 1915172 GGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAA 1915231
Query 251922 GATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCG 251981
||| | | ||| || || ||||| | | ||||| || | | |||| || ||
Sbjct 1915232 GATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCG 1915291
Query 251982 CTCAGCAAA---CGACTTGTCCTGCGACAAGAACTTCTGTGCCCATGCTGCCTTCTTTCC 252038
||| |||| |||| ||| | || | |||| | ||||| | ||||||||
Sbjct 1915292 CTCGCCAAAGGTGGACTCGTCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTT 1915351
Query 252039 AACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATCGTCCTCGAT 252098
| ||| || || ||||| || | || || || | ||||| ||||| |||
Sbjct 1915352 GATGCAGGGAATGGTCTCGATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGAT 1915411
Query 252099 GAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGTTGAACATCTGGTA 252158
| | || | ||| || ||||| | ||||| |||||| || | | |||||| |
Sbjct 1915412 GTATGTGTCGATCAGCAGCGAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 1915471
Query 252159 AGCATAGAA----TAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGTTGTTTGCAA 252214
| ||||| | | | | ||| ||| | | || || |||||| | | |
Sbjct 1915472 GCCGTAGAAGCACTTGGC-CTCGG--GGGCCTG-CACCTCGCCGGAAAACCGCTCCACCA 1915527
Query 252215 TGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCTTGATGAAGT 252274
|||||| | || ||||| || | | ||||||||| | || | | |||||||
Sbjct 1915528 GGTTCTCGTTGACGATGCCGTCCGAGGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGA 1915587
Query 252275 GACGCTCATCGTCGTTGAGCTTGTCACGCCAGTCGGCAATGTCCTGATTCAGAGGAACTT 252334
||||| |||| ||||||| || ||||||| | ||||||| ||| | ||
Sbjct 1915588 ACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTCGCCCATGTCCTTGCCGAGATCGATTT 1915647
Query 252335 CTTCCACCGTCCAGAATGTGGACACCGCCTTCTTGTACAT-TGCGAACACATCAGGGTAC 252393
| || |||||||||| | | | | |||||||||||||| ||| | | || |||||
Sbjct 1915648 CCTCGGCCGTCCAGAACGACGCCTCGGCCTTCTTGTACATCTGC-CAGATCTCGTGGTAC 1915706
Query 252394 TTGATTGGGAA-AGCA 252408
| ||| ||||| ||||
Sbjct 1915707 TGGATGGGGAAGAGCA 1915722
>seq1
Length=4810746
Score = 147 bits (162), Expect = 4e-30
Identities = 421/631 (67%), Gaps = 25/631 (4%)
Strand=Plus/Plus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|| |||||||||||| ||||||| ||||| || || || |||| ||||||||||| |||
Sbjct 2137034 GGAGAGGATCTGTGTAACTGTGAGTTCTCTCTGGCTTACGGTGCCAAGATTCTGCTGAAC 2137093
Query 279405 TCTACCC-GCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463
|||| || || || | ||||| ||| || || |||||| || ||||| || ||
Sbjct 2137094 CGAACCCAGCTTCGACTT-AAGCGAGGCCGACGATACGGTCTCTGTGGCCCCAACGGTGC 2137152
Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523
|||||| ||| || ||||| |||||||| ||||| ||| | || || ||||| || |
Sbjct 2137153 TGGTAAGTCCACCCTGATGCGAGCCATTGCCAACGGCCAGGTCGAGGG-TTTCCCCACCC 2137211
Query 279524 ATCTGAGGTAAGGA-CAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCA 279582
| | || || | || | || || |||||||| ||| | | | | || | ||
Sbjct 2137212 AGGAGGAGTGTCGAACTGTCTTCGTCGACCACGACATTGACGGTACCCACGCCGACACCA 2137271
Query 279583 CTGTGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642
|| | |||| ||||| || | | | || | || | | |||||||
Sbjct 2137272 ACGTTGTTGACT-----ACGTCCGAAAGACCGCCGGTG-AGTCCATCGGTACTGAGGAGG 2137325
Query 279643 TCATCCAGAAACTGGAGGC-CAA--TGGTTTTGATGAAAGA-ATG--CGTAATCTGCCAG 279696
||| ||| | | || | | | | || | | || ||| | ||| |||
Sbjct 2137326 AGGTCC-GAACCCAGCTGCTCGACTTCCTGTTCACCGACGAGATGACCCGAAT--GCCCA 2137382
Query 279697 TAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGC 279756
| |||||||| ||||| ||||||||||||||||| || | |||| | || |
Sbjct 2137383 TCACCTCTCTGTCTGGTGGATGGAAGATGAAGCTGGCTCTTGCCACCGCCGTCCTCCGAA 2137442
Query 279757 GTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCT 279816
|||||| |||| |||||||||||||| |||||||| |||| ||| |||||| || |
Sbjct 2137443 AGGCCGATATCCTGCTGCTTGATGAGCCTACCAACCATCTGGATACCGTCAACGTTGCTT 2137502
Query 279817 GGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACT 279876
|||| || |||||| | || ||| | | || | ||| |||| ||||| |||||||
Sbjct 2137503 GGCTGGTCAACTACCTCAACA-CCTGTGG--TATTACCTCCATCATCGTCTCCCACGACT 2137559
Query 279877 CTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGCTCT 279936
|||| ||||| || ||| || ||| || ||||| |||| | | ||||||
Sbjct 2137560 CTGGTTTCCTCGACAACGTCTGTGAGTACATTATCCACTACGAGCGA---TTCAAGCTCC 2137616
Query 279937 CCAAGCACATCGGCAACCTGTCTGCTTTCGT 279967
||| ||| || ||||| || | |||||
Sbjct 2137617 GAAAGTACAAGGGTAACCTCTCCGAGTTCGT 2137647
Score = 95.1 bits (104), Expect = 2e-14
Identities = 118/162 (73%), Gaps = 0/162 (0%)
Strand=Plus/Plus
Query 280677 CTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAG 280736
|| ||||| || |||||| || ||||||| || || || ||||| ||||| || |||
Sbjct 2138405 CTTGGTCTCGAGCCCGAGCTTGTCTCTCACTCCCGAATCCGAGGTCTGTCTGGTGGACAG 2138464
Query 280737 AAGGTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGAC 280796
|||||||| || || | | || | ||||| | || || |||||||||| ||
Sbjct 2138465 AAGGTCAAGCTGGTGCTTGCCGCCTGTACCTGGCAGCGACCCCATCTGATCGTTCTTGAT 2138524
Query 280797 GAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|||||||||||||||||||| || || || || ||||||
Sbjct 2138525 GAGCCTACCAACTATCTGGATCGAGACTCTCTTGGAGCTCTG 2138566
>seq2
Length=2949780
Score = 105 bits (116), Expect = 1e-17
Identities = 411/637 (65%), Gaps = 13/637 (2%)
Strand=Plus/Plus
Query 293140 CGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGATGTCTTGTACACT 293199
|| |||||||| | || || | | |||| || ||||||||| ||||||||||
Sbjct 78992 CGGTCAGCAGCCATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTCTTGTACAGG 79051
Query 293200 GCCTTGACATCAGGATGAATGCCAATAACCTTCTGGATAGACCCTCCGTTGGCAATAATC 293259
|||||| || | | ||| | ||||| | || || || ||| | ||
Sbjct 79052 TCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATT 79111
Query 293260 TGGTTCTTCATTGTCTCGGACCA-AGTCCCACGAGCAATGAGCTCGCGGACAAGGTAAGA 293318
|||||||||| ||||| ||| ||||| || ||| || || || || | |
Sbjct 79112 CGGTTCTTCATGGTCTCATTCCACAGTCCGACCT-CAACCAGGTCCTTGAGCAGCCAGGG 79170
Query 293319 GTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGTAAATGTTCGAAGTGATGGG 293378
|||||||| ||||||| ||||| || || || ||||||||| || ||| |||
Sbjct 79171 GTTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGG 79230
Query 293379 TTCGGCTGCCTCAACAGACCCGCAAATCTGAGCAGTAGATGCGGTAGGCATAAGAGCAGT 293438
||| ||| | ||| |||||| | || || ||||| ||||| | ||
Sbjct 79231 CTCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCAC 79290
Query 293439 CGTCAGAGAGTTCCTCACACC---CTTCTTGACACGCGATTCGAGACCCGCCCAGTCC-A 293494
| ||| ||||| | || || |||| ||| | | |||| | |||| ||| |
Sbjct 79291 CAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCA 79350
Query 293495 GAGCAGTCTGAGGT-GTAACACCCCAGAGATGATACTGCATGATACCCTTGCTGGCAGGA 293553
|||| || |||| || || ||| |||| | |||||| | ||||||| |||||||
Sbjct 79351 GAGC--TCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGGTCACCCTTGGAGGCAGGA 79408
Query 293554 GACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCGCAAGATGCCTCAACA 293613
|| |||| ||||| | || ||| | |||| | | |||| | || ||||||||
Sbjct 79409 GAGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGGCCATCTCGTAGGAGGCCTCAACG 79468
Query 293614 GCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGAGCCTGCTCAGAGTCA 293673
|| | ||| ||| ||||||||||| ||||||||| |||| ||| || |||
Sbjct 79469 GCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCA 79528
Query 293674 AACGGCATCTTCAGCTGG--AAGAACACATCCTGCAGACCCTGTACACCTACACCAACGG 293731
|| || | || | || | ||| || ||||||||| ||||| | | ||| ||
Sbjct 79529 AAGGGAA--GTCGGAGGGCCATGAAAGTGTCAGCCAGACCCTGGACACCCAGAGCAATGG 79586
Query 293732 GGCGACGACGCTTGTTGCTCGTCTCTGCCTCGGGAAC 293768
| || | ||| ||||| | ||| |||||||| ||
Sbjct 79587 GTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGGAC 79623
>seq9
Length=923155
Score = 84.2 bits (92), Expect = 4e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 217837 TGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGCC 217896
|||||||| || || ||||||||||||||||| ||| |||||| ||| ||| | ||
Sbjct 620419 TGCACTCTGATTCTCACAGAGGGAGACTCAGCCATGACGATGGCAAACGCCGGTTTGGCG 620360
Query 217897 GTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCGC 217956
||| | || || || || || || || || || || |||||| |||| ||||||||
Sbjct 620359 GTGATTGGCCGAGAGAGATACGGCGCTTTTCCGCTGCGAGGTAAGATGCTGAACGTGCGA 620300
Query 217957 GATGCCTCG 217965
|| || |||
Sbjct 620299 GAAGCGTCG 620291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027836286402799
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