Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq6 161 9e-35
>seq6
Length=1650383
Score = 161 bits (178), Expect = 9e-35
Identities = 392/586 (67%), Gaps = 27/586 (5%)
Strand=Plus/Minus
Query 20189 TTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGG-GTCTAAGACCAGTAAC 20247
||||| | ||| || ||||||| ||||| || | ||| || ||| | || | || ||
Sbjct 1315110 TTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCCACAGTCCA-GATCGGTCAC 1315052
Query 20248 ATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACC 20307
|| |||| ||| ||| || || | || ||||||||| || || || |||| |||
Sbjct 1315051 CTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTTGAAGGGGACACCCAGACC 1314992
Query 20308 CATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCT--CACCG-TCAG----CT---- 20356
|| || | |||| ||| |||||||| || || ||| | ||| || | ||
Sbjct 1314991 CAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCCCCGCTCCGAGTTCTTGTA 1314932
Query 20357 ----ACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGC 20412
||||| || || || |||| ||||||||| || || |||||| |||| || ||
Sbjct 1314931 CGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGCCATCTTGGACAGATCGGC 1314872
Query 20413 CGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTAT----TAAAT 20468
|||||||| ||| ||| |||||||| || || || || || | || | | |||
Sbjct 1314871 AGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGGGTTGGTCTTGAGAGTGTGAAT 1314812
Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528
| | | | | || || | |||||||| | ||||| | || ||| ||
Sbjct 1314811 CACC----TGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTCTGTGTCGCAGTCTTTGT 1314756
Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588
|| | || ||||| || | ||| ||||| || || || ||||||| || ||||| | ||
Sbjct 1314755 ACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTCCCAGGTCTCCCTCACGTC 1314696
Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648
|||| |||| || | |||| |||||| |||| || ||| |||||| || | ||
Sbjct 1314695 TGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCGTTTCCGTCCCAGATGT-GA 1314637
Query 20649 CTCCTGTTCTTGAA-AGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCT 20707
| | || | | |||| | || ||| |||| || || |||||| |||||||||
Sbjct 1314636 ATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACCACAGCAGCTCT 1314577
Query 20708 TGCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAA 20753
| || |||||||| | || |||||||||||||| || | ||||
Sbjct 1314576 TCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGAGGAA 1314531
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441372584830760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |