Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq3 136 9e-27
seq1 114 3e-20
>seq3
Length=2682169
Score = 136 bits (150), Expect = 9e-27
Identities = 217/309 (70%), Gaps = 7/309 (2%)
Strand=Plus/Minus
Query 333687 TCGGTAAGGGCGTAGTAA--CTCGCTGATTCGGGACGCTTCTTCACGAACTCGGACAGAT 333744
||||| |||| ||||||| || || ||||| ||| ||| || || |||| ||| |
Sbjct 2005894 TCGGTCAGGGTGTAGTAAGCCTTGCCC--TCGGGTCGCACCTTGACAAAGTCGGCCAGGT 2005837
Query 333745 TTCCCTTGTACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAG 333804
| |||||||| | |||||| ||| ||||| || ||| |||||| || |
Sbjct 2005836 TGCCCTTGTAGTAGACCAGCTTCTTGTTC---TCGTAGTGCGCAATGTCGGTGCACACGG 2005780
Query 333805 CGTCGAGGAACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCA 333864
|||||||||| |||||||||||||| ||||||| | | | |||| | || | ||
Sbjct 2005779 CGTCGAGGAAGCCGGAGTCGTGTGAAACAATCAGCGAGGTGATGTCCGTGTGGGCCACCA 2005720
Query 333865 GGTATTCAATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAA 333924
|||| || ||||||| | ||||| ||| |||||||| || |||||||| || |
Sbjct 2005719 GGTAGTCCTGCAGCCACTTGACGTTGCCCACGTCCAGATGGTTAGTAGGCTCGTCCAGCA 2005660
Query 333925 GTAGTAGCTTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTC 333984
| || | | || |||| |||||| || || || || | || ||||| ||||| ||||
Sbjct 2005659 GCAGAATGTCGGCCTTCATGAGCATGGCTCGGGCCAGCTCCAGCTTCATCTTCCATCCTC 2005600
Query 333985 CTGAAAGAG 333993
| || ||||
Sbjct 2005599 CAGACAGAG 2005591
Score = 95.1 bits (104), Expect = 3e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 243511 GAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGC 243570
|| || |||| | ||| |||| ||| | |||||| | || ||| | || | |||
Sbjct 1915078 GAGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGC 1915019
Query 243571 ATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCG 243630
|||||| | | |||||| | |||||||| || || || |||||||| | | | ||
Sbjct 1915018 ATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGGCTGCTGGTGGCC 1914959
Query 243631 CTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCG 243690
|| || | || || |||||||||| |||||||| | ||| |||||| ||| |||
Sbjct 1914958 CTCGGAAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCG 1914899
Query 243691 CTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725
|| || || || ||||||||||| ||||| ||
Sbjct 1914898 CTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1914864
>seq1
Length=4810746
Score = 114 bits (126), Expect = 3e-20
Identities = 132/175 (75%), Gaps = 2/175 (1%)
Strand=Plus/Minus
Query 334181 ggggAACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCC 334240
|||||| || || | ||| ||||| |||| || |||||||| || || ||||| || ||
Sbjct 2137207 GGGGAAACCCTCGACCTGGCCGTTGGCAATGGCTCGCATCAGGGTGGACTTACCAGCACC 2137148
Query 334241 GTTTGGCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACC-GCGTATTGTTCA 334299
||| || ||||| |||||||| || || ||||| || | ||| | | || |||||
Sbjct 2137147 GTTGGGGCCACAGAGACCGTATCGTCGGCCTCGCTTAAG-TCGAAGCTGGGTTCGGTTCA 2137089
Query 334300 GAAGAATTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
| ||||| || |||| || |||||||| || ||||| | |||||||||||| ||
Sbjct 2137088 GCAGAATCTTGGCACCGTAAGCCAGAGAGAACTCACAGTTACACAGATCCTCTCC 2137034
Score = 87.8 bits (96), Expect = 4e-12
Identities = 240/361 (66%), Gaps = 14/361 (4%)
Strand=Plus/Minus
Query 333637 TGATACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGG 333696
||| |||||| ||||| |||||||||||||| | || ||| | | ||
Sbjct 2137739 TGACACCCTCAAGGAAACCGGGCTCGGGGAAAGAGAAGTTGATCTCGGAGGCACCCAGCT 2137680
Query 333697 CGTAGTAACTC---GCTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGT 333753
|||||||| | || || ||| |||||| ||||||||||| || || |||||||
Sbjct 2137679 CGTAGTAAGACTTGGCGGAA---GGAACCTTCTTGACGAACTCGGAGAGGTTACCCTTGT 2137623
Query 333754 ACTTCTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTGCAAACAGCGTCGAGGA 333813
|||| ||||| | | ||||| |||||||| | || || ||||||||
Sbjct 2137622 ACTTTCGGAGCTTGAATC---GCTCGTAGTGGATAATGTACTCACAGACGTTGTCGAGGA 2137566
Query 333814 ACCCGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGGTTGATCAGGTATTCAA 333873
| || |||||||| || || || | | | | || | | |||| | | ||||| | |
Sbjct 2137565 AACCAGAGTCGTGGGAGACGATGATGGAGGTAA--TACCACAGGT-GTTGAGGTAGTTGA 2137509
Query 333874 TCAGCCACCTCACGTTAGACAC-AGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932
|||||| ||||| ||| | ||||||||||| ||||| ||||| || || |
Sbjct 2137508 CCAGCCAAGCAACGTT-GACGGTATCCAGATGGTTGGTAGGCTCATCAAGCAGCAGGATA 2137450
Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCAAGAGCGAGTTTCATTTTCCACCCTCCTGAAAGA 333992
| || || |||| | || |||||||| || ||||| ||||| || || || |||
Sbjct 2137449 TCGGCCTTTCGGAGGACGGCGGTGGCAAGAGCCAGCTTCATCTTCCATCCACCAGACAGA 2137390
Query 333993 G 333993
|
Sbjct 2137389 G 2137389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879448904650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |