Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq2 401 6e-107 seq5 205 9e-48 >seq2 Length=2949780 Score = 401 bits (444), Expect = 6e-107 Identities = 1221/1867 (65%), Gaps = 56/1867 (3%) Strand=Plus/Minus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776 ||| | ||||||| |||||| ||||||||| | ||||| || | || | | || Sbjct 80667 TACAACTACTTTGGCTTCAAGACTCTGGAGCGAGCATACCTGCTGCGAG-TCAACGGTGC 80609 Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836 ||| | ||| |||| || ||| || | ||||| || | |||| || |||||| |||| Sbjct 80608 CGTTGCTGAGAGACCTCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGA 80549 Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895 ||| ||| | | | | | || || ||||| | ||| | ||| || Sbjct 80548 CATTGCCCGAGCTATCGAGACCTA-CAACTACATGTCTCAGAAGTACTTCACCCATGCTT 80490 Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955 | || ||||||| |||||| || ||||| ||| |||||||| ||||||||||| | | Sbjct 80489 CTCCCACCCTGTACAACGCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCA 80430 Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015 | |||| |||||||||| ||| || | ||||| |||||| ||||| ||| | Sbjct 80429 ACATGAAGGACGACTCCATCGACGGCATCTACGACACTCTCAAGACTTGTGCTCTCATTT 80370 Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTG--TCCACGACGTACGTGCCAGGGGTTCCTA 94073 | || | ||| || || || || || || ||||| || | || || | || ||||| Sbjct 80369 CCAAGTCCGCTGGAGGCATTGG--TCTGTCCATCCACAACATCCGAGCTACCGGCTCCTA 80312 Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133 |||| || ||||| || ||||||||||| |||| || ||||| || || | |||||| Sbjct 80311 CATCGCTGGAACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAA 80252 Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193 | | || || ||||| |||||||| || | | | || | || || | || || Sbjct 80251 CACCGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCT 80192 Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253 ||||||||||||| ||||| | ||| ||| ||||||||||||||||| || || Sbjct 80191 GGAGCCCTGGCACGACGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGA 80132 Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310 ||||| | ||| |||| || ||| ||||||||| | || ||||| || ||| | Sbjct 80131 ---GGAGATTCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGA 80075 Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370 || |||||| | ||| ||| |||| || | || ||||| || |||||||| || Sbjct 80074 GCGAGTCGAGCAGAACGCCGAGTGGACCCTCATGTGCCCCAACGAGTGTCCCGGCCTTGA 80015 Query 94371 CGACGTTTGTGGATCG-CGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGG-CAA 94427 ||||| | || || || || ||| | |||| | | ||||| | |||| | | Sbjct 80014 TGACGTCTACGG--CGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGA 79957 Query 94428 GGCC-AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486 |||| | ||| || || |||||||||| | || || ||||| ||| | Sbjct 79956 GGCCGACGAA--CCATCCCCGCCCAGAAGCTGTGGTACCACATTCTGGACTGTCAGACCG 79899 Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546 || | || | |||| ||| | | ||||||||| |||| |||||||||||| || Sbjct 79898 AGTCCGGCAACCCCTTCATGCTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGA 79839 Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| || |||||| || || |||||| ||||||||||||||| | ||||| | Sbjct 79838 ACCTGGGTACTATCAAGTCGTCCAACCTGTGCTGCGAGATTGTCGAGTACTCGTCTCCTG 79779 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATG 94663 ||||| | || || || ||||||| |||||| ||| | ||||| || ||||| | Sbjct 79778 ACGAGGTGGCCGTCTGCAACCTGGCCTCCATTGCGCTGCCTACTTTTGTCACTCGAGACG 79719 Query 94664 ---CCTACACG-TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG 94719 || || || ||||| |||| | ||| | || ||| || || | Sbjct 79718 AGACCAACTCGTTCTACGACTTC-AAGAAGCTGCACGATATTGCCAA------GG---TG 79669 Query 94720 ATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAG 94779 || || ||||| ||| | |||||| |||| |||||||||||| ||||| || Sbjct 79668 ATTGTGCGAAACCTCAACGCCATCATCGACCGAAACTACTACCCCGTCCCCGAGGCCAAG 79609 Query 94780 AACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTG 94839 || || ||| || || || ||||| | | || ||||||||| | || ||| | | Sbjct 79608 AAGTCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGACACTTTC 79549 Query 94840 GTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTC 94899 || | || || |||| || || | || || | | || | | || ||| Sbjct 79548 ATGGCCCTCCGACTTCCCTTTGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTC 79489 Query 94900 GAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG 94959 || | ||| || |||| ||| | | ||| | | ||||| |||||||| Sbjct 79488 GAGACCATCTACCACGGAGCCGTTGAGGCCTCCTACGAGATGGCCCTTGAGGACGGCG-- 79431 Query 94960 CCACACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017 | |||| | |||| || || || | | | |||| | ||||| || || | Sbjct 79430 -CCTACGAGACCTTCCAGGGCTCTCCTGCCTCCA--AGGGTGACCTGCAGTTTGATCTGT 79374 Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAAC 95077 || |||| ||||| | || | || ||||| | ||| || | | || || Sbjct 79373 GGAACGTGACTCCCTCCGAGCTCTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGA 79314 Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137 ||| || |||| ||||||| ||||||||||||||||| |||||||| ||||||| | Sbjct 79313 CCGGAATGCGAAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCTCGCAGATTC 79254 Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197 | ||| |||||||| ||||| |||| |||||||||| | ||| | || ||||| | Sbjct 79253 TCGGCTTCAACGAGTGTTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTG 79194 Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC----TGACGTCTCTGGGT 95253 | || || |||| | ||||| || || ||||| ||| ||| || Sbjct 79193 CTGGCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTC----GGA 79138 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC 95313 ||||| ||| | | ||||||| | | | || |||||| ||||| ||||||||| Sbjct 79137 CTGTGGAATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATC 79078 Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CG 95372 || | || || |||| ||||||| || |||||||||||||||||||| ||||| | Sbjct 79077 CCCAACATCCCCCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCGCAGAAG 79018 Query 95373 CGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNN 95432 || || |||| || || | ||| |||||||| |||| Sbjct 79017 CG-AATCATCGAGATGGCTGCTGACCGATCCCCCTTCATTGACCAGTCCCAGTCTCTCAA 78959 Query 95433 NNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAG 95492 || || |||| || || | || |||||| |||||||| |||| Sbjct 78958 CATCCACATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAA 78899 Query 95493 AAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACA 95552 ||||||||||||||||| ||||| || ||||||||| | | || | | |||| || Sbjct 78898 GAAGGGTCTCAAGACCGGCATGTACTACCTGCGAACCATGGCTGCTGCTGCCCCCATCCA 78839 Query 95553 GTTCGCC 95559 |||| || Sbjct 78838 GTTCACC 78832 >seq5 Length=1963011 Score = 205 bits (226), Expect = 9e-48 Identities = 1079/1707 (63%), Gaps = 48/1707 (3%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 ||| | || ||||| |||||||| || ||||| | ||| |||| |||||||| ||| Sbjct 1037037 GCCTCTCCCACCCTCTTCAACGCAGGCACCCCCCAGGGCCAGCTGTCGTCGTGTTTTCTG 1037096 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 || | | || ||||||||| |||||| | ||| | ||||||| |||||| Sbjct 1037097 GTGGCCATGGCTGCGGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAA 1037156 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG---- 94067 ||||| ||| ||| || || ||||| | | ||||| || | || |||| ||| Sbjct 1037157 ATCTCGAAAACCGCCGGCGGCATCGGTCTGCATATCCACAACATCCGAGCCAAGGGCGCT 1037216 Query 94068 -TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 || |||| ||| ||| || | |||| ||| |||| || |||||| | || | Sbjct 1037217 ATTATTACAG----GGTCTCAA-GGAAGATCCAGTGGCATCGTGCCCATGCTCAGAGTGT 1037271 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | ||| | ||||||||||||||||| | | | || | || || Sbjct 1037272 TCAACAACACCGCGAGGTACGTGGACCAGGGTGGGAACAAGCGTCCCGGCGCGTTTGCCA 1037331 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 ||||||| ||||| |||||||| ||| | | | ||| || | ||||| || ||||| | Sbjct 1037332 TCTATCTGGAGCCGTGGCACGCCGACATTCTCGATTTTCTCAATCTGCGGAAAAACCATG 1037391 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 | ||| | | || ||| | ||||| |||||||| | |||||||| ||||| || | Sbjct 1037392 GAGCCGAAGAGAACAGAGCCCGGGACCTGTTCTACGCATTGTGGGTGCCCGACCTGTTCA 1037451 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATG-TCCCGGA 94365 |||| || |||||| | ||| | || |||||||| ||| | ||| ||| Sbjct 1037452 TGAAGCGGGTCGAGCGGGGCGAAAAGTGGTCGTTGTTCTGTCCCAA-GAAGGCTCCGGGA 1037510 Query 94366 CTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425 ||| ||||| || || | |||||| | ||| | ||||| |||| Sbjct 1037511 CTGGAAGACGTGTGGGGCCCCGAGTTTGAACAAAAGTACGAGGAGTACGAGAAAAGGGGC 1037570 Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG-TACAGGT 94484 | || || | || | |||||| | ||| | |||| ||| | Sbjct 1037571 CTGTACAACGCCCAGATCAACGCCCAGGAGCTGTTCAAGGCGATTCT-GACGAGCCAGAT 1037629 Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGC 94543 || || || |||| ||| ||| ||||||| ||| |||||| ||||||||||||| Sbjct 1037630 CGAAACCGGAGGCCCCTTCATGCTGTACAAGGACAGCTG-CAACGCAAAGTCCAACCAGC 1037688 Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603 || |||| || ||||| || || |||||||| || || ||| |||| | || | Sbjct 1037689 AGAACCTGGGAACCATCAAATCGTCCAACCTGTGCACGGAAATCGTCCAGTACTCGTCGC 1037748 Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGC------ 94657 |||| ||| | || ||||| ||||||| ||| | ||| | || || | Sbjct 1037749 CGGAAGAGGTGGCGGTGTGCAACCTGGCGTCCGTGGCTCTGCCGGAGTTTGTCCAGCTCA 1037808 Query 94658 --GAGA-TGCCTACACGTCTACTGCTTCGTTCGA-TCTGGAGGA--GCTTGTGAACTTCG 94711 |||| | | | || | | | || | | | | ||||| | || | || | || Sbjct 1037809 AGGAGAGCGACAAAACCACCGCAGGGTCCTACAACTTTGGAGAACTGCATAAGACCGTC- 1037867 Query 94712 CGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771 | ||| ||||| ||||| | ||||| |||| |||||||||| || Sbjct 1037868 --AAACACATGACGCGAAACCTCAACAGCATCATCGAGGCCAACTGCTACCCCGTCAAGG 1037925 Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831 |||| || | || ||| | ||||| || || | | | ||||| |||||| | || | Sbjct 1037926 AGGCAGAAACGTCCAACAAGCGCCATCGTCCGATTGCCGTGGGCGTGCAGGGTCTGGCAG 1037985 Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGA---CTCTGTCGACGCGGCGGGTTTGAATT 94888 ||| | | ||| | |||| ||||||| || | || || || |||| |||| Sbjct 1037986 ACGTGTTTATGAAGCTGCGCATGCCCTATGATAGCCCT---GAAGCTGCGGAACTGAACG 1038042 Query 94889 TGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAG-A 94947 | ||| ||||| | |||||| ||| ||| || | | |||||| | || | | Sbjct 1038043 TTCTCATCTTCGAGACCATTTACCACGCTGCC-TG---CGAAGCGTCCATTGAGCTGGCA 1038098 Query 94948 TCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCA 95006 | || || || | || || | || || | ||| | | |||| || | || Sbjct 1038099 GCAGAACTGGGACCCTATGAGTC-ATACGAGGGCAGTCCTGCCAGCAAGGGTCTTCTGCA 1038157 Query 95007 GTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCT 95064 ||| || || ||| || ||||||| ||| | ||||||| |||| | | Sbjct 1038158 GTTTGATCTGTGGAACAAGACTCCCTCGGATCTCTGGGACTGGGCCCTGCTCAA--GACC 1038215 Query 95065 GATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCC 95124 || | ||| || || || ||| ||||||| ||||| |||||||| || || || Sbjct 1038216 AATCTCGCCAAGCATGGCATGCGCAACTCGCTGCTGGTGGCTCCCATGCCTACCGCTTCT 1038275 Query 95125 ACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAAC 95184 || | |||||||| ||| ||||||||| ||||| |||| ||| |||||| | ||| Sbjct 1038276 ACCTCCCAGATCCTCGGCCACAACGAGTGCTTCGAGCCCTACACGTCCAACATTTACCTG 1038335 Query 95185 AGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACG 95244 |||| |||| ||||| || || | || ||||| | || | |||||| | Sbjct 1038336 CGGCGAGTGCAGGCCGGCGAGTTTCTGGTGGTCAACCACTGGCTGATGAAGGACCTCATC 1038395 Query 95245 TCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTC 95304 ||||| ||||| || || | ||||||| | | | | || ||||||||| || Sbjct 1038396 AAGCTGGGCATGTGGAACGAGGAGATGAAGAACCGAATCATCCACGACAACGGCTCGATC 1038455 Query 95305 CAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364 ||| |||| | || || || || ||||| || | ||| |||| |||||| ||| Sbjct 1038456 CAGTCCATCACCCAGATTCCCGAAAACATCCGCGCCGTGTACCGCACCGCGTGGGAAATC 1038515 Query 95365 CCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNN 95424 | ||| || ||||| || ||||| || | || | ||| ||| Sbjct 1038516 AAGGCCCGCAGCATCATCGACATGGCTGCCGCGCGAGCACCGTACATTGACCAATCGCAG 1038575 Query 95425 NNNNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTAC 95484 ||| ||| || | ||| ||||| || ||||| ||| || Sbjct 1038576 TCGCTCAACATTTTCATGCGCGAAATCACCCACGGCAAAATCACCGCCATGCATTTCCAC 1038635 Query 95485 GGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGAC 95544 || |||| || |||||||||||| || |||||||| |||| || ||| || | | Sbjct 1038636 GGCTGGAAAATGGGTCTCAAGACGGGCATGTATTACCTGCGTACTCCGCCCGCAGCAGCC 1038695 Query 95545 TCCATACAGTTCGCCCTAGAAAAGTCG 95571 |||| |||||| | | || |||||| Sbjct 1038696 GCCATCCAGTTCACAGTGGACAAGTCG 1038722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722958822440