Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq2 401 6e-107
seq5 205 9e-48
>seq2
Length=2949780
Score = 401 bits (444), Expect = 6e-107
Identities = 1221/1867 (65%), Gaps = 56/1867 (3%)
Strand=Plus/Minus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCT-CAAGATGGATGGCAG 93776
||| | ||||||| |||||| ||||||||| | ||||| || | || | | ||
Sbjct 80667 TACAACTACTTTGGCTTCAAGACTCTGGAGCGAGCATACCTGCTGCGAG-TCAACGGTGC 80609
Query 93777 GGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGA 93836
||| | ||| |||| || ||| || | ||||| || | |||| || |||||| ||||
Sbjct 80608 CGTTGCTGAGAGACCTCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGA 80549
Query 93837 CAT-GCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCCA 93895
||| ||| | | | | | || || ||||| | ||| | ||| ||
Sbjct 80548 CATTGCCCGAGCTATCGAGACCTA-CAACTACATGTCTCAGAAGTACTTCACCCATGCTT 80490
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
| || ||||||| |||||| || ||||| ||| |||||||| ||||||||||| | |
Sbjct 80489 CTCCCACCCTGTACAACGCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCA 80430
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| |||| |||||||||| ||| || | ||||| |||||| ||||| ||| |
Sbjct 80429 ACATGAAGGACGACTCCATCGACGGCATCTACGACACTCTCAAGACTTGTGCTCTCATTT 80370
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTG--TCCACGACGTACGTGCCAGGGGTTCCTA 94073
| || | ||| || || || || || || ||||| || | || || | || |||||
Sbjct 80369 CCAAGTCCGCTGGAGGCATTGG--TCTGTCCATCCACAACATCCGAGCTACCGGCTCCTA 80312
Query 94074 CATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAA 94133
|||| || ||||| || ||||||||||| |||| || ||||| || || | ||||||
Sbjct 80311 CATCGCTGGAACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAA 80252
Query 94134 CGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCT 94193
| | || || ||||| |||||||| || | | | || | || || | || ||
Sbjct 80251 CACCGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCT 80192
Query 94194 CGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGA 94253
||||||||||||| ||||| | ||| ||| ||||||||||||||||| || ||
Sbjct 80191 GGAGCCCTGGCACGACGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGA 80132
Query 94254 TCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAA 94310
||||| | ||| |||| || ||| ||||||||| | || ||||| || ||| |
Sbjct 80131 ---GGAGATTCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGA 80075
Query 94311 ACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTC 94370
|| |||||| | ||| ||| |||| || | || ||||| || |||||||| ||
Sbjct 80074 GCGAGTCGAGCAGAACGCCGAGTGGACCCTCATGTGCCCCAACGAGTGTCCCGGCCTTGA 80015
Query 94371 CGACGTTTGTGGATCG-CGTTTTGAAG-ACTTGTATGCTCGTTACGAATCGCAGGG-CAA 94427
||||| | || || || || ||| | |||| | | ||||| | |||| | |
Sbjct 80014 TGACGTCTACGG--CGACGAGTTCAAGCAGCTGTACGAGCAGTACGAGAAGGAGGGCCGA 79957
Query 94428 GGCC-AGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGG 94486
|||| | ||| || || |||||||||| | || || ||||| ||| |
Sbjct 79956 GGCCGACGAA--CCATCCCCGCCCAGAAGCTGTGGTACCACATTCTGGACTGTCAGACCG 79899
Query 94487 AGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGC 94546
|| | || | |||| ||| | | ||||||||| |||| |||||||||||| ||
Sbjct 79898 AGTCCGGCAACCCCTTCATGCTCTACAAGGACTCCTGCAACCGAAAGTCCAACCAGAAGA 79839
Query 94547 ACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606
|||| || |||||| || || |||||| ||||||||||||||| | ||||| |
Sbjct 79838 ACCTGGGTACTATCAAGTCGTCCAACCTGTGCTGCGAGATTGTCGAGTACTCGTCTCCTG 79779
Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGT---GCGAGATG 94663
||||| | || || || ||||||| |||||| ||| | ||||| || ||||| |
Sbjct 79778 ACGAGGTGGCCGTCTGCAACCTGGCCTCCATTGCGCTGCCTACTTTTGTCACTCGAGACG 79719
Query 94664 ---CCTACACG-TCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGG 94719
|| || || ||||| |||| | ||| | || ||| || || |
Sbjct 79718 AGACCAACTCGTTCTACGACTTC-AAGAAGCTGCACGATATTGCCAA------GG---TG 79669
Query 94720 ATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAG 94779
|| || ||||| ||| | |||||| |||| |||||||||||| ||||| ||
Sbjct 79668 ATTGTGCGAAACCTCAACGCCATCATCGACCGAAACTACTACCCCGTCCCCGAGGCCAAG 79609
Query 94780 AACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTG 94839
|| || ||| || || || ||||| | | || ||||||||| | || ||| | |
Sbjct 79608 AAGTCCAACATGCGACACCGACCCATTGCTCTGGGTGTCCAGGGTCTGGCTGACACTTTC 79549
Query 94840 GTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTGAACATATTC 94899
|| | || || |||| || || | || || | | || | | || |||
Sbjct 79548 ATGGCCCTCCGACTTCCCTTTGAGTCCGAGGAGGCCAAGAAGCTCAACATCCAGATCTTC 79489
Query 94900 GAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGG 94959
|| | ||| || |||| ||| | | ||| | | ||||| ||||||||
Sbjct 79488 GAGACCATCTACCACGGAGCCGTTGAGGCCTCCTACGAGATGGCCCTTGAGGACGGCG-- 79431
Query 94960 CCACACGAATCGTTCCGCGGATCGCC--CTTGGAACAGGGCATTTTTCAGTTCGACCTCT 95017
| |||| | |||| || || || | | | |||| | ||||| || || |
Sbjct 79430 -CCTACGAGACCTTCCAGGGCTCTCCTGCCTCCA--AGGGTGACCTGCAGTTTGATCTGT 79374
Query 95018 GGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATCAAAC 95077
|| |||| ||||| | || | || ||||| | ||| || | | || ||
Sbjct 79373 GGAACGTGACTCCCTCCGAGCTCTGGGAGTGGGACGATCTCAAGGCCAAGATCATGAAGA 79314
Query 95078 ACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCC 95137
||| || |||| ||||||| ||||||||||||||||| |||||||| ||||||| |
Sbjct 79313 CCGGAATGCGAAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCTCGCAGATTC 79254
Query 95138 TTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCG 95197
| ||| |||||||| ||||| |||| |||||||||| | ||| | || ||||| |
Sbjct 79253 TCGGCTTCAACGAGTGTTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTG 79194
Query 95198 CCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACC----TGACGTCTCTGGGT 95253
| || || |||| | ||||| || || ||||| ||| ||| ||
Sbjct 79193 CTGGCGAGTTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTC----GGA 79138
Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC 95313
||||| ||| | | ||||||| | | | || |||||| ||||| |||||||||
Sbjct 79137 CTGTGGAATGAGACCATGAAGAACCGAATCGTGGCCGACAACGGATCCGTGCAGAACATC 79078
Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAG-CG 95372
|| | || || |||| ||||||| || |||||||||||||||||||| ||||| |
Sbjct 79077 CCCAACATCCCCCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCGCAGAAG 79018
Query 95373 CGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNN 95432
|| || |||| || || | ||| |||||||| ||||
Sbjct 79017 CG-AATCATCGAGATGGCTGCTGACCGATCCCCCTTCATTGACCAGTCCCAGTCTCTCAA 78959
Query 95433 NNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAG 95492
|| || |||| || || | || |||||| |||||||| ||||
Sbjct 78958 CATCCACATCAAGGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAA 78899
Query 95493 AAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACA 95552
||||||||||||||||| ||||| || ||||||||| | | || | | |||| ||
Sbjct 78898 GAAGGGTCTCAAGACCGGCATGTACTACCTGCGAACCATGGCTGCTGCTGCCCCCATCCA 78839
Query 95553 GTTCGCC 95559
|||| ||
Sbjct 78838 GTTCACC 78832
>seq5
Length=1963011
Score = 205 bits (226), Expect = 9e-48
Identities = 1079/1707 (63%), Gaps = 48/1707 (3%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || ||||| |||||||| || ||||| | ||| |||| |||||||| |||
Sbjct 1037037 GCCTCTCCCACCCTCTTCAACGCAGGCACCCCCCAGGGCCAGCTGTCGTCGTGTTTTCTG 1037096
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
|| | | || ||||||||| |||||| | ||| | ||||||| ||||||
Sbjct 1037097 GTGGCCATGGCTGCGGACTCCATCGACGGAATCTACGATACCCTCAAGACGTGTGCGCAA 1037156
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGG---- 94067
||||| ||| ||| || || ||||| | | ||||| || | || |||| |||
Sbjct 1037157 ATCTCGAAAACCGCCGGCGGCATCGGTCTGCATATCCACAACATCCGAGCCAAGGGCGCT 1037216
Query 94068 -TTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126
|| |||| ||| ||| || | |||| ||| |||| || |||||| | || |
Sbjct 1037217 ATTATTACAG----GGTCTCAA-GGAAGATCCAGTGGCATCGTGCCCATGCTCAGAGTGT 1037271
Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186
|||||||| | ||| | ||||||||||||||||| | | | || | || ||
Sbjct 1037272 TCAACAACACCGCGAGGTACGTGGACCAGGGTGGGAACAAGCGTCCCGGCGCGTTTGCCA 1037331
Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246
||||||| ||||| |||||||| ||| | | | ||| || | ||||| || ||||| |
Sbjct 1037332 TCTATCTGGAGCCGTGGCACGCCGACATTCTCGATTTTCTCAATCTGCGGAAAAACCATG 1037391
Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306
| ||| | | || ||| | ||||| |||||||| | |||||||| ||||| || |
Sbjct 1037392 GAGCCGAAGAGAACAGAGCCCGGGACCTGTTCTACGCATTGTGGGTGCCCGACCTGTTCA 1037451
Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATG-TCCCGGA 94365
|||| || |||||| | ||| | || |||||||| ||| | ||| |||
Sbjct 1037452 TGAAGCGGGTCGAGCGGGGCGAAAAGTGGTCGTTGTTCTGTCCCAA-GAAGGCTCCGGGA 1037510
Query 94366 CTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGC 94425
||| ||||| || || | |||||| | ||| | ||||| ||||
Sbjct 1037511 CTGGAAGACGTGTGGGGCCCCGAGTTTGAACAAAAGTACGAGGAGTACGAGAAAAGGGGC 1037570
Query 94426 AAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACG-TACAGGT 94484
| || || | || | |||||| | ||| | |||| ||| |
Sbjct 1037571 CTGTACAACGCCCAGATCAACGCCCAGGAGCTGTTCAAGGCGATTCT-GACGAGCCAGAT 1037629
Query 94485 GGAGACGGGTACGCCCTACATCTTGTTCAAGGAC-TCTGTCAACGCCAAGTCCAACCAGC 94543
|| || || |||| ||| ||| ||||||| ||| |||||| |||||||||||||
Sbjct 1037630 CGAAACCGGAGGCCCCTTCATGCTGTACAAGGACAGCTG-CAACGCAAAGTCCAACCAGC 1037688
Query 94544 AGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTC 94603
|| |||| || ||||| || || |||||||| || || ||| |||| | || |
Sbjct 1037689 AGAACCTGGGAACCATCAAATCGTCCAACCTGTGCACGGAAATCGTCCAGTACTCGTCGC 1037748
Query 94604 CGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGC------ 94657
|||| ||| | || ||||| ||||||| ||| | ||| | || || |
Sbjct 1037749 CGGAAGAGGTGGCGGTGTGCAACCTGGCGTCCGTGGCTCTGCCGGAGTTTGTCCAGCTCA 1037808
Query 94658 --GAGA-TGCCTACACGTCTACTGCTTCGTTCGA-TCTGGAGGA--GCTTGTGAACTTCG 94711
|||| | | | || | | | || | | | | ||||| | || | || | ||
Sbjct 1037809 AGGAGAGCGACAAAACCACCGCAGGGTCCTACAACTTTGGAGAACTGCATAAGACCGTC- 1037867
Query 94712 CGGGAAGGATGGTCTTGAACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGG 94771
| ||| ||||| ||||| | ||||| |||| |||||||||| ||
Sbjct 1037868 --AAACACATGACGCGAAACCTCAACAGCATCATCGAGGCCAACTGCTACCCCGTCAAGG 1037925
Query 94772 AGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGG 94831
|||| || | || ||| | ||||| || || | | | ||||| |||||| | || |
Sbjct 1037926 AGGCAGAAACGTCCAACAAGCGCCATCGTCCGATTGCCGTGGGCGTGCAGGGTCTGGCAG 1037985
Query 94832 ACGCGCTGGTGATGATGCGTCTGCCCTACGA---CTCTGTCGACGCGGCGGGTTTGAATT 94888
||| | | ||| | |||| ||||||| || | || || || |||| ||||
Sbjct 1037986 ACGTGTTTATGAAGCTGCGCATGCCCTATGATAGCCCT---GAAGCTGCGGAACTGAACG 1038042
Query 94889 TGAACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAG-A 94947
| ||| ||||| | |||||| ||| ||| || | | |||||| | || | |
Sbjct 1038043 TTCTCATCTTCGAGACCATTTACCACGCTGCC-TG---CGAAGCGTCCATTGAGCTGGCA 1038098
Query 94948 TCGGACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCA 95006
| || || || | || || | || || | ||| | | |||| || | ||
Sbjct 1038099 GCAGAACTGGGACCCTATGAGTC-ATACGAGGGCAGTCCTGCCAGCAAGGGTCTTCTGCA 1038157
Query 95007 GTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGG--AAGCTCTACGCGCT 95064
||| || || ||| || ||||||| ||| | ||||||| |||| | |
Sbjct 1038158 GTTTGATCTGTGGAACAAGACTCCCTCGGATCTCTGGGACTGGGCCCTGCTCAA--GACC 1038215
Query 95065 GATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCC 95124
|| | ||| || || || ||| ||||||| ||||| |||||||| || || ||
Sbjct 1038216 AATCTCGCCAAGCATGGCATGCGCAACTCGCTGCTGGTGGCTCCCATGCCTACCGCTTCT 1038275
Query 95125 ACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAAC 95184
|| | |||||||| ||| ||||||||| ||||| |||| ||| |||||| | |||
Sbjct 1038276 ACCTCCCAGATCCTCGGCCACAACGAGTGCTTCGAGCCCTACACGTCCAACATTTACCTG 1038335
Query 95185 AGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACG 95244
|||| |||| ||||| || || | || ||||| | || | |||||| |
Sbjct 1038336 CGGCGAGTGCAGGCCGGCGAGTTTCTGGTGGTCAACCACTGGCTGATGAAGGACCTCATC 1038395
Query 95245 TCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTC 95304
||||| ||||| || || | ||||||| | | | | || ||||||||| ||
Sbjct 1038396 AAGCTGGGCATGTGGAACGAGGAGATGAAGAACCGAATCATCCACGACAACGGCTCGATC 1038455
Query 95305 CAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATC 95364
||| |||| | || || || || ||||| || | ||| |||| |||||| |||
Sbjct 1038456 CAGTCCATCACCCAGATTCCCGAAAACATCCGCGCCGTGTACCGCACCGCGTGGGAAATC 1038515
Query 95365 CCGCAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNN 95424
| ||| || ||||| || ||||| || | || | ||| |||
Sbjct 1038516 AAGGCCCGCAGCATCATCGACATGGCTGCCGCGCGAGCACCGTACATTGACCAATCGCAG 1038575
Query 95425 NNNNNNNNNNNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTAC 95484
||| ||| || | ||| ||||| || ||||| ||| ||
Sbjct 1038576 TCGCTCAACATTTTCATGCGCGAAATCACCCACGGCAAAATCACCGCCATGCATTTCCAC 1038635
Query 95485 GGGTGGAGAAAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGAC 95544
|| |||| || |||||||||||| || |||||||| |||| || ||| || | |
Sbjct 1038636 GGCTGGAAAATGGGTCTCAAGACGGGCATGTATTACCTGCGTACTCCGCCCGCAGCAGCC 1038695
Query 95545 TCCATACAGTTCGCCCTAGAAAAGTCG 95571
|||| |||||| | | || ||||||
Sbjct 1038696 GCCATCCAGTTCACAGTGGACAAGTCG 1038722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722958822440
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