Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 1e-32
seq5 122 8e-23
seq7 107 2e-18
seq2 95.1 1e-14
>seq3
Length=2682169
Score = 154 bits (170), Expect = 1e-32
Identities = 470/720 (65%), Gaps = 25/720 (3%)
Strand=Plus/Minus
Query 46861 TGGCCTTCTTTGCCGCCGCCGACAGCATAGTCAACATCAACATCATCGAGCACATGCAGC 46920
||||||||||||||||| | ||| |||| |||||| ||| | | |||| |
Sbjct 1915569 TGGCCTTCTTTGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTGGAGCGGTTTTCCG 1915510
Query 46921 GCACCGTGCCCGAACTGGAGGCGCAGTACTTTTACAATCAACAAGTGCTCATCGAATGCA 46980
|| |||| | | ||||| ||| ||| ||| || | | || || ||
Sbjct 1915509 GCGAGGTGCAGGCCCCCGAGGCCAAGTGCTTCTACGGCTTCCAGATCATGATGGAGAACA 1915450
Query 46981 TCCACACGGAAATGTACAACCTTCTCATACACGCCCTCATCAAAGACGAAGAGAAGC-AA 47039
||||| |||||| ||| || || || || | |||||| ||| || ||| ||
Sbjct 1915449 TCCACTCGGAAACCTACTCGCTGCTGATCGACACATACATCAAGGACCCCAAGGAGCGAA 1915390
Query 47040 GCGACGCTTTTGAACGGTTTCGAGAGCATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCC 47099
| || || || |||| |||||| ||| |||||| | | |||||||| |||||
Sbjct 1915389 CCTAC-CTGTTCAACGCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCG 1915331
Query 47100 ATGAAGTACATTGAAAACGAAAACGTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATC 47159
| |||| || |||| | ||| | | ||| || | || || || ||| |
Sbjct 1915330 CTCAAGTGGATCTCCGACGACGAGTCCACCTTTGGCGAGCGACTCATTGCCTTTGCCGCC 1915271
Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTACATGAAAACCAAAGGA 47219
|| |||||| |||| ||||| ||| ||||| | || || | | || | |||
Sbjct 1915270 GTGGAGGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGT 1915211
Query 47220 GTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACACC 47279
| ||||||||||| || || ||||||||| ||||| ||||||| || ||||||||
Sbjct 1915210 CTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACG 1915151
Query 47280 AACTTTGCCTGTCTC---TACTA-CAACACTAGAGTCGA---TCAAAAGTTGGACGTGCC 47332
||||||||||||| | || || | | ||| || || || || |
Sbjct 1915150 GACTTTGCCTGTCTGCTGTTCTCGCACCTCGAGAACCGGCCCTCCAA-----GAAG---- 1915100
Query 47333 CACCGTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGC 47392
| ||| ||| || ||| ||| ||||| | ||| ||| |||||| | |||| ||
Sbjct 1915099 -ATTGTCGAGGACGTGATTGTCGAGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGACGC 1915041
Query 47393 TCTGCCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGT 47452
|| ||| | | |||| |||||||| || | ||| | ||||||| || |||||
Sbjct 1915040 GCTCCCCTGCGGTCTGCTGGGCATGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGT 1914981
Query 47453 CGCCGACCGCCTGCTCGTTCAGCT---AAAGTATCCCAAGATTTACCACACCGAGAATCC 47509
|||||||| ||||| || || ||| | ||||| | ||| || || || ||
Sbjct 1914980 GGCCGACCGGCTGCTGGTGGCCCTCGGAAACT---CCAAGGTCTACAACTCCACCAACCC 1914924
Query 47510 ATTCGAGTTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGT 47569
||||| || ||| | ||||| ||||| | |||||||||||||| ||||||||||| ||
Sbjct 1914923 CTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1914864
>seq5
Length=1963011
Score = 122 bits (134), Expect = 8e-23
Identities = 126/165 (76%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 146043 GAGGGCCTTGATGAGATACTGGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAG 146102
|||| |||| || || | |||||||||||| ||||||||||||| | || |||| |||
Sbjct 1038392 GAGGTCCTTCATCAGCCAGTGGTTGACCACCAGAAACTCGCCGGCCTGCACTCGCCGCAG 1038333
Query 146103 ATACACGTTGCTGGTGAACGGCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGT 146162
|| | |||| ||| | |||||||| ||||||||| ||||| ||||| | || |
Sbjct 1038332 GTAAATGTTGGACGTGTAGGGCTCGAAGCACTCGTTGTGGCCGAGGATCTGGGAGGTAGA 1038273
Query 146163 AGCGGTAGGCATGTACGCCACCAGCAAAGAGTTTCTCACGCCGTG 146207
||||||||||||| |||||||||| ||||| | || ||| ||
Sbjct 1038272 AGCGGTAGGCATGGGAGCCACCAGCAGCGAGTTGCGCATGCCATG 1038228
Score = 89.7 bits (98), Expect = 5e-13
Identities = 333/512 (65%), Gaps = 19/512 (4%)
Strand=Plus/Minus
Query 146680 TACTGCACAATCTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTT- 146738
||||| || || || | ||| |||||| | |||||| | |||| || | |||||
Sbjct 1037740 TACTGGACGATTTCCGTGCACAGGTTGGACGATTTGATGGTTCCCAGGTTCTGCTGGTTG 1037681
Query 146739 -ACTAAACTTGTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGG 146797
||| | ||||||| ||||||||| |||||| | || || |||||||||| | |
Sbjct 1037680 GACTTTGC--GTTGCAGCTGTCCTTGTACAGCATGAAGGGGCCTCCGGTTTCGATCTGG- 1037624
Query 146798 TCTCGACGATGAATC----TAAACAAATCTCTGGCCTTTA-CTTGTCTTTCGTACAGTTT 146852
|||| | ||||| | |||| || ||| || | || | | || ||||||
Sbjct 1037623 -CTCGTCA--GAATCGCCTTGAACAGCTCCTGGGCGTTGATCTGGGCGTT-GTACAGGCC 1037568
Query 146853 ATTCTTTTCGTATTTCTCGTACAATATTTCAAAACTAGAACCGTACTCGTCGAGGAGGCC 146912
| || ||||| | ||||||| | |||||| | || || |||| || ||
Sbjct 1037567 CCTTTTCTCGTACTCCTCGTACTTTTGTTCAAACTCGGGGCCCCACACGTCTTCCAGTCC 1037508
Query 146913 GGGATACTTTTTGGGACAGAACAGCGACCATTCTTTATTCTCCTTCACGCGTTCCATAAA 146972
||| ||| ||||||||||||| |||||| | || | || || || | ||| ||
Sbjct 1037507 CGGAGCCTTCTTGGGACAGAACAACGACCACTTTTCGCCCCGCTCGACCCGCTTCATGAA 1037448
Query 146973 CAAATCGGGAATCCA-AAGGCCCAGCATCAAGTCGCGAGCCTTGGCGTCCTCGGAGCCCA 147031
|| ||||| | ||| || || || | || ||| || || || || |||| ||
Sbjct 1037447 CAGGTCGGGCACCCACAATGCGTAG-AACAGGTCCCGGGCTCTGTTCTCTTCGGCTCCAT 1037389
Query 147032 TGTTGCGTCTCAAGTTGAGGACATCGTAAATTTCCGGATGCCAAGGCTCCACGTATGCGG 147091
||| | || ||||| | |||| ||| || | ||||| ||||||| || ||
Sbjct 1037388 GGTTTTTCCGCAGATTGAGAAAATCGAGAATGTCGGCGTGCCACGGCTCCAGATAGATGG 1037329
Query 147092 CGAGTGCGCCTTTTCGC---TTACCGCCCTGATCGACGTGGCGCACCATGTTATTGAAGA 147148
| | ||||| ||| || || ||||| || |||| | | | |||| ||||| |
Sbjct 1037328 CAAACGCGCCGGGACGCTTGTTCCCACCCTGGTCCACGTACCTCGCGGTGTTGTTGAACA 1037269
Query 147149 CTCGTAACATGGACACGAGGCCGCCGGATTTT 147180
||| | ||||| ||||| ||| | |||| ||
Sbjct 1037268 CTCTGAGCATGGGCACGATGCCACTGGATCTT 1037237
>seq7
Length=1109975
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | ||||| || | ||| | || ||||| || || || ||||| ||
Sbjct 1062782 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1062723
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || ||||| || || ||| |||| | ||||||||| || || ||
Sbjct 1062722 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1062663
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||||| ||||| ||| |||||| | | ||| ||
Sbjct 1062662 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGT-CGATGGTGTCGGAAGACTCCAC 1062604
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | ||| | || || ||||| || || || ||||||||||||||
Sbjct 1062603 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1062556
>seq2
Length=2949780
Score = 95.1 bits (104), Expect = 1e-14
Identities = 121/163 (74%), Gaps = 3/163 (2%)
Strand=Plus/Minus
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| || ||||| || || ||| |||| | ||||||||| || || || ||||||||||||
Sbjct 2456671 TCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTG 2456612
Query 127019 TCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077
||| ||| || ||||| |||| || | |||||| | | ||| || |||| ||| |
Sbjct 2456611 TCCTGGATCTTGGACTTGACGTTG-TCAATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 2456553
Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA-TGGCTTA 127119
|| ||||| || || || || ||||| || |||| ||| |||
Sbjct 2456552 GGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCACTGGGTTA 2456510
Score = 86.0 bits (94), Expect = 6e-12
Identities = 334/511 (65%), Gaps = 27/511 (5%)
Strand=Plus/Plus
Query 147070 TGCCAAGGCTCCACGTATGCGGCGAGTGCGCCTTTTCGCTTA---CCGCCCTGATCGACG 147126
||||| ||||||| ||| ||| | || || |||||| |||||||| ||||||
Sbjct 80180 TGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGTCGACG 80239
Query 147127 TGGCGCACCATGTTATTGAAGACTCGTAACATGGACACGAGGCCGCCGGATTTTG---TG 147183
| || | |||| ||| | ||||| | ||||| ||||| ||| ||| || ||
Sbjct 80240 TATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTG 80299
Query 147184 GTGCC---GTTGTATTGAGC-----GCT--GACGCTTTGCACGCTCAGCCCGAGACCTCC 147233
|| || | |||| |||| ||| || | | || | | ||| || | |||||
Sbjct 80300 GTTCCAGCGATGTAG-GAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGCCTCC 80358
Query 147234 GCCCAGATTCGAAATCAAAGCGGAC-TCGTGCAAGGTCTTGTAGATGCCGTCGATGCTGT 147292
| || ||||| | ||| | || || || | | |||||||||||||||| ||
Sbjct 80359 AGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAG-TGTCGTAGATGCCGTCGATGGAGT 80417
Query 147293 CTTCCTTGATGCATTG--CAGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGC 147350
| ||||| ||| ||| ||||||||||| |||| ||||| | ||||| ||
Sbjct 80418 CGTCCTTCATG--TTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGCGTT 80475
Query 147351 AAACAGCGTGGGGCTGGCGTGCGTGAACGTGC-CCAGACTCATCAATTGATACGTTTCAA 147409
|||| ||||| || || ||||| || | | || ||| | | || || || |
Sbjct 80476 GTACAGGGTGGGAGAAGCATGGGTGAA-GTACTTCTGAGACATGTAGTTGTAGGTCTCGA 80534
Query 147410 TGGCGCTCATAACGTCATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGG 147469
| || | || ||| |||||||| || | | | || ||||||| ||| ||||| |
Sbjct 80535 TAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTGAG 80594
Query 147470 GTCGTTCCGCAATCACGTCATTGACTTTTAATAGATATCCATTGGT-CAGAGTTTTGAAA 147528
||| || |||| | | |||||| | || ||| | | | | |||||| |||||
Sbjct 80595 GTCTCTCAGCAACGGCACCGTTGACTCGCAGCAGGTATGC-TCGCTCCAGAGTCTTGAAG 80653
Query 147529 CCAAAGTACTTGTAGTCGTAGTCCCTGTTGT 147559
|||||||| |||||| | |||| |||| ||
Sbjct 80654 CCAAAGTAGTTGTAGGTGAAGTCTCTGTCGT 80684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500568193360
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