Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 3e-29
>seq3
Length=2682169
Score = 143 bits (158), Expect = 3e-29
Identities = 175/236 (74%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| ||||||||||| ||||||||||| || || |||||| ||| ||
Sbjct 1915143 GCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCG 1915202
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | |||||| || | ||| ||||| ||||| |||||
Sbjct 1915203 GGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATG 1915262
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACT--TTGTATCA- 127696
|||||||| || || |||| || |||||| |||||| ||||| | || |
Sbjct 1915263 CCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGG---TGGACTCGTCGTCGGAG 1915319
Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752
| |||||| | |||||| | ||||| |||| ||| || || | ||||| ||| ||
Sbjct 1915320 ATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGC 1915375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506900915240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |