Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3 280 2e-70
seq2 235 9e-57
seq5 154 2e-32
>seq3
Length=2682169
Score = 280 bits (310), Expect = 2e-70
Identities = 535/781 (69%), Gaps = 13/781 (2%)
Strand=Plus/Plus
Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687
||||| ||| | ||||| ||||||||| |||||||||||||| ||| || ||
Sbjct 1914848 CTTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTT 1914907
Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747
|||||||| |||| ||||| | || ||| ||| | |||||| ||| ||||
Sbjct 1914908 CTCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGAGGGCCACCAG 1914967
Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAG 159807
|| || ||| |||||||| || ||||| ||||| ||| ||| || ||||||||
Sbjct 1914968 CAGCCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAG 1915027
Query 159808 CCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAAT 159867
| ||||||||| || | ||| ||||||| ||| || | || || ||| |||||
Sbjct 1915028 ACCGCAGGGGAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCG---ACAAT 1915084
Query 159868 C---TGCGAGACACGTTCGTACCCCGGCTTGCCCAAAAT-GTGGTCCTTAAACAGGAGGC 159923
| | | |||| || | | || ||| | | ||| | ||||| || |
Sbjct 1915085 CACGTCCTCGACAA--TCTT--CTTGGAGGGCCGGTTCTCGAGGTGCGAGAACAGCAGAC 1915140
Query 159924 ACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGC 159983
| |||||||| |||||| |||||||| || ||||||| ||||||||| | | | ||||
Sbjct 1915141 AGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGC 1915200
Query 159984 CCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGA 160043
| ||||||| || ||| |||||||| || |||| ||||| | ||| |||||||
Sbjct 1915201 CGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGA 1915260
Query 160044 TCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGG 160103
| ||||||||||| ||||| || | ||| | ||| ||||| | || | | ||| |
Sbjct 1915261 TGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCGTCGTCGGAGA 1915320
Query 160104 TCCACCTTTTGGCCCATTCAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAA 160163
||||| | ||||| || |||||||| |||||| || ||| ||||| |||||| |
Sbjct 1915321 TCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCGTTGA 1915380
Query 160164 ACA-ATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATT 160222
||| | || | ||||||| |||||||| || | |||||| |||||| ||
Sbjct 1915381 ACAGGTAGGTTC-GCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTT 1915439
Query 160223 TCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATAC 160282
|| | ||| | || || || ||||| ||| |||||| | | ||||| | |
Sbjct 1915440 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCC 1915499
Query 160283 TGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCA 160342
|||||||| | |||| | |||| || | || || | ||||| | ||| |||
Sbjct 1915500 TGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCA 1915559
Query 160343 AAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAG 160402
||||| |||| |||||| |||||||| | |||||| |||||||| | || ||||||
Sbjct 1915560 AAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAG 1915619
Query 160403 T 160403
|
Sbjct 1915620 T 1915620
>seq2
Length=2949780
Score = 235 bits (260), Expect = 9e-57
Identities = 344/480 (72%), Gaps = 10/480 (2%)
Strand=Plus/Plus
Query 203849 GTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTTTAGG 203908
|||||||| |||| | | |||| | || ||| ||| ||||||||||||||||| ||
Sbjct 78833 GTGAACTGGATGGGGGCAGCAGCAGCCATGGTTCGCAGGTAGTACATGCCGGTCTTGAGA 78892
Query 203909 CCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATG 203968
||||||| ||| ||||| | ||||||||| | || |||| || | ||||||| |||
Sbjct 78893 CCCTTCTTCCAGCCGTAGAAGTGCATGGAGGTGAGCTTGCCCATGGTGGGGTCCTTGATG 78952
Query 203969 TGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATA 204028
|| ||||| ||||||||| ||||| ||||| || | || || || ||||| | |||
Sbjct 78953 TGGATGTTGAGAGACTGGGACTGGTCAATGAAGGGGGATCGGTCAGCAGCCATCTCGATG 79012
Query 204029 ATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAGGCACA 204088
|| ||||||||||||||||||||| |||||| ||| ||| || | | || || |
Sbjct 79013 ATTCGCTTCTGCGAAATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATG 79072
Query 204089 TCTTCCCACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC---TCATCCTCGTCTCCTC 204144
| | | || ||| | || ||||||||||||| | || || || | ||||| |
Sbjct 79073 T-TGGGGATGTTCTGCACGGATCCGTTGTCGGCCACGATTCGGTTCTTCATGGTCTCAT- 79130
Query 204145 CCCCCACATGCCCAACCT-GATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGT 204203
||||| | || |||| | ||| ||| | ||| |||||||| ||||| || |
Sbjct 79131 --TCCACA-GTCCGACCTCAACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACT 79187
Query 204204 CTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGT 204263
| || | ||||| | ||| | | | | |||| |||| | || ||||| |||||||
Sbjct 79188 CGCCAGCAAGCACTCGTCGAGAGTAAATGTTGGAGGTGTAGGGCTCGAAACACTCGTTGA 79247
Query 204264 TGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCA 204323
||||| |||||| | |||| ||| ||||||||||| |||| ||||| ||||| ||||
Sbjct 79248 AGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCACCAGCAGCGAGTTTCGCA 79307
Score = 187 bits (206), Expect = 4e-42
Identities = 566/858 (66%), Gaps = 20/858 (2%)
Strand=Plus/Plus
Query 204923 CCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATT 204982
|||| | || |||||| ||||| ||||| |||||||||||||| | |||||| || |
Sbjct 79832 CCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTG 79891
Query 204983 CCGTTCTCCATCTGAGATCGCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTC 205042
||| ||| ||||| | |||||||||| ||||| | | || | || |||
Sbjct 79892 CCGGACTCGGTCTGACAGTCCAGAATGTGGTACCACAGCTTCTGGGCGGGGA--TGGTTC 79949
Query 205043 ACGTACATC--CCTTGAGACTCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACA 205100
| || || | |||||| | ||||||| | || || ||||| |
Sbjct 79950 GTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGA 80009
Query 205101 CGTCCATCA-GCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTTTC 205159
|||| |||| | || ||||| | ||||| ||||| || | |||| || | ||| | |
Sbjct 80010 CGTC-ATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCAC-TCGG--CGTTCTGC 80065
Query 205160 ---ACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTA 205216
|| | |||||| ||||||||| |||||| || | |||||||| ||||| | |
Sbjct 80066 TCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGCTCGA 80125
Query 205217 ATTCCGTCGTCTCCAAGGTTCTTTTTCAAGTC-CAGCCAAGCCGCA-ATGTCGGCGTGCC 205274
|| | || | || |||||||| || || ||| || || | | |||| ||||||
Sbjct 80126 ATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAG--AACTCGAAGACGTCGTCGTGCC 80183
Query 205275 ACGGCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGC 205334
| ||||| | ||| ||| | || || || | |||||| || |||||||| || |
Sbjct 80184 AGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATC 80243
Query 205335 GAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGC 205394
||| | |||| | ||||||||||| ||||| | |||||||| ||| ||||| || |
Sbjct 80244 GAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTC 80303
Query 205395 TGTTGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAAC 205454
|||| ||||| ||| | | |||| ||||| | ||||| || ||||
Sbjct 80304 CAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGCCTCCAGCGG 80363
Query 205455 ACTTGGCGATCTGGGCGC-ACTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCC 205513
|||||| || | || | | ||||| |||||| ||||||||| ||||||| ||||||
Sbjct 80364 ACTTGGAAATGAGAGCACAAGTCTTG-AGAGTGTCGTAGATGCCGTCGATGGAGTCGTCC 80422
Query 205514 GCCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAAGAGC 205573
|| | || || | ||||| | || || || | |||||| |||| | | ||
Sbjct 80423 TTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGCGTTGTACAGG 80482
Query 205574 GTGGGGCTGGCGTGGCTGAAGCGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTC 205633
||||| || ||| ||||| ||||| || | |||||||||| | | |
Sbjct 80483 GTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGTCTCGATAGCTCGG 80542
Query 205634 TCCAGATCGAAGCCGTGAATACCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCC 205693
| | ||| |||||| ||||| | | | | ||||| | || |||||||||| |
Sbjct 80543 GCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTGAGGTCTCT-C 80601
Query 205694 ATCACCCTC-TCGTTCACCTTGAGCAGATAGGCTCTCTCTAGGGTGCGGATGGCAAAAAA 205752
| || | | |||| || ||||| || |||| ||| || || || | |||| |
Sbjct 80602 AGCAACGGCACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGAAGCCAAAGTA 80661
Query 205753 GTTGAAGGTGTAGTCCCT 205770
|||| ||||| |||| ||
Sbjct 80662 GTTGTAGGTGAAGTCTCT 80679
>seq5
Length=1963011
Score = 154 bits (170), Expect = 2e-32
Identities = 511/777 (66%), Gaps = 42/777 (5%)
Strand=Plus/Minus
Query 203836 CGTCTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACAT 203895
|| ||||||||| |||||||| |||||| | || ||| | | ||| || |||||
Sbjct 1038722 CGACTTGTCCACTGTGAACTGGATGGCGGCTGCTGCGGGCGGAGTACGCAGGTAATACAT 1038663
Query 203896 GCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTT 203955
||| ||||| || ||| | | ||| |||| | ||||||| | | ||||| |||
Sbjct 1038662 GCCCGTCTTGAGACCCATTTTCCAGCCGTGGAAATGCATGGCGGTGATTTTGC---CGTG 1038606
Query 203956 GGGG---TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATC 204012
|| | ||| |||| |||||| || ||||| |||||| ||| | || || || |
Sbjct 1038605 GGTGATTTCGCGCATGAAAATGTTGAGCGACTGCGATTGGTCAATGTACGGTGCTCGCGC 1038546
Query 204013 TGCGGCCATATTGATAATGGTCTTCTG--CGAAATCTCCCACACCGTCTTGAACACGTCT 204070
|| ||||| | ||| ||| || | | | || |||||| | || | ||||| |
Sbjct 1038545 GGCAGCCATGTCGATGATG--CTGCGGGCCTTGATTTCCCACGCGGTGCGGTACACGGCG 1038488
Query 204071 CTGGTGTGTTGAGGCACATCTTCCC-ACGTCCTG-ATCGAGCCGTTGTCGGCCATCAGTC 204128
| | ||| || || | ||| | | ||| ||||||||||||||| || | ||
Sbjct 1038487 CGGATGTTTTCGGGAA--TCTGGGTGATGGACTGGATCGAGCCGTTGTCGTGGATGATTC 1038430
Query 204129 TCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGT 204188
|| || ||||||| ||||||||||| | |||| || ||| || ||| | |||
Sbjct 1038429 GGTTCTTCATCTCCTCGTTCCACATGCCCAGCTTGATGAGGTCCTTCATCAGCCAGTGGT 1038370
Query 204189 TGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTT 204248
||| | | |||| || |||| | |||| | || | | | |||| ||| | || |
Sbjct 1038369 TGACCACCAGAAACTCGCCGGCCTGCACTCGCCGCAGGTAAATGTTGGACGTGTAGGGCT 1038310
Query 204249 CGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGA 204308
|||| |||||||| ||||| ||||| | ||| || || ||||||||||||| |
Sbjct 1038309 CGAAGCACTCGTTGTGGCCGAGGATCTGGGAGGTAGAAGCGGTAGGCATGGGAGCCACCA 1038250
Query 204309 GCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTC---GT 204365
|||| |||||||||| || | || || || ||| || || |||||| |
Sbjct 1038249 GCAGCGAGTTGCGCATGCCATGCTTGGCGAGATTGGTCTTGAGCAGGGCCCAGTCCCAGA 1038190
Query 204366 GCATCGCACTGGGTTTCACGCCCCACATGTCGAACTG--AAAGATGCCTTGACTGACTGG 204423
| ||| | ||| || | ||||| || ||||| |||| ||||| ||| | ||
Sbjct 1038189 G-ATCCGA--GGGAGTCTTGTTCCACAGATCAAACTGCAGAAGA-CCCTTG-CTGGCAGG 1038135
Query 204424 GCTGCCCTTGTACGTCGGATAAGGCTGATCC----TCTTCTGCCAGCT---TGCACG--A 204474
||||||| ||| | | ||| || ||| ||| ||||||||| || |||
Sbjct 1038134 ACTGCCCTCGTATGACTCATAGGG----TCCCAGTTCTGCTGCCAGCTCAATGGACGCTT 1038079
Query 204475 GGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGGCCTC 204534
|| | || ||||| ||| |||||||| ||||| ||||||| | | || || ||
Sbjct 1038078 CGCAGGCA--GCGTG---GTAAATGGTCTCGAAGATGAGAACGTTCAGTTCCGCAGCTTC 1038024
Query 204535 CGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAAGCCCTGCACTCC 204591
| | ||| | | || | |||| | ||||||||| |||| |||||||| ||
Sbjct 1038023 AGGGCTATCATAGGGCATGCGCAGCTTCATAAACACGTCTGCCAGACCCTGCACGCC 1037967
Score = 107 bits (118), Expect = 3e-18
Identities = 322/489 (66%), Gaps = 16/489 (3%)
Strand=Plus/Minus
Query 205098 ACACGTCCATCAGCCCTGGACATTTTTTGGGACACATCAGAGACCACATCTGATCGTCTT 205157
||||||| ||| || ||| || |||||||| | || |||||| | | | |
Sbjct 1037523 ACACGTCTTCCAGTCCCGGAGCCTTCTTGGGACAGAACAACGACCACTTTTCGCCCCGCT 1037464
Query 205158 TCACCCTCTCCATAAACAGGTCGCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAA 205217
|||| || ||| ||||||||| | ||||| |||| ||||| || ||||| ||
Sbjct 1037463 CGACCCGCTTCATGAACAGGTCGGGCACCCACAATGCGTAGAACAGGTCCCGGGCTCTGT 1037404
Query 205218 TTCCGTCGTCTCCAAGGTTCTTTTTCAAGTCCAGCCAAGCCGCAATGTCGGCGTGCCACG 205277
| | ||| ||||| |||| || || | || || | |||||||||||||||||
Sbjct 1037403 TCTCTTCGGCTCCATGGTTTTTCCGCAGATTGAGAAAATCGAGAATGTCGGCGTGCCACG 1037344
Query 205278 GCTCTAACCACACGGCCATTGCGCCTGGCCTCTTGTTCCCACCCTGGTCC----ACCATG 205333
|||| | | | ||| | ||||| || | ||||||||||||||||||| ||| |
Sbjct 1037343 GCTCCAGATAGATGGCAAACGCGCCGGGACGCTTGTTCCCACCCTGGTCCACGTACCTCG 1037284
Query 205334 CGAGTCATCGCGTTGAAAACTCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCG-T 205392
|| || | |||||| |||| ||||| ||||| | || ||| | || | |
Sbjct 1037283 CG-GTGTT---GTTGAACACTCTGAGCATGGGCACGATGCCACTGGATCTTCCTTGAGAC 1037228
Query 205393 GCTGT--TGATGGCCGAGCCTTCAGCCCTCACGTTGGAGATGGCCGCGCCAATCCCGCCA 205450
|||| | || || ||| | || | | |||| ||| | || || |||||
Sbjct 1037227 CCTGTAATAATAGC---GCCCTTGGCTCGGATGTTGTGGATATGCAGACCGATGCCGCCG 1037171
Query 205451 GAACACTTGGCGATCTGGGCGCAC-TCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATC 205509
| || | ||| || || ||| ||||| || || |||||| || ||||||| ||
Sbjct 1037170 GCGGTTTTCGAGATTTGCGCACACGTCTTG-AGGGTATCGTAGATTCCGTCGATGGAGTC 1037112
Query 205510 GTCCGCCAGTGTCACCAGATAGCACGAAGCCAGCTTGGCAAAGTTGGTGCCCGCGTGGAA 205569
| |||| | ||||||| | ||||| | ||||| | | | |||||| |||| |||
Sbjct 1037111 CGCAGCCATGGCCACCAGAAAACACGACGACAGCTGGCCCTGGGGGGTGCCTGCGTTGAA 1037052
Query 205570 GAGCGTGGG 205578
||| |||||
Sbjct 1037051 GAGGGTGGG 1037043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795154812361840
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