Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq2 159 4e-34
seq7 120 3e-22
>seq2
Length=2949780
Score = 159 bits (176), Expect = 4e-34
Identities = 173/227 (76%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426
||||||| | ||||| ||||| |||| || |||||| ||||| |||||||| ||
Sbjct 2456743 CCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2456684
Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486
||||| || |||| |||||||||||||||||||| || | ||||||||||| | ||
Sbjct 2456683 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGA 2456624
Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCG-TGTCGCTCGATTCCAC 46545
| || |||||||||| |||||| ||||| ||| | || | ||||| || |||||
Sbjct 2456623 ATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCAATGGTGTCGGAAGACTCCAC 2456565
Query 46546 ATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCA 46592
|| | |||||||| ||||| || || || || |||||||||||||
Sbjct 2456564 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518
>seq7
Length=1109975
Score = 120 bits (132), Expect = 3e-22
Identities = 159/218 (73%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| || ||||| | || |||||| ||||| |||||||| || || || || ||
Sbjct 1062770 CGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCG 1062711
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| ||||||||||| |||||||| || | ||||||||||| | || | | |||||||
Sbjct 1062710 TCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTG 1062651
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 1062650 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGAT 1062592
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTT 46595
|| || || || || || || ||||| || |||||||
Sbjct 1062591 AGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1062554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565238124446280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |