Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3 412 3e-110
seq2 132 5e-26
seq7 111 2e-19
>seq3
Length=2682169
Score = 412 bits (456), Expect = 3e-110
Identities = 646/915 (71%), Gaps = 17/915 (2%)
Strand=Plus/Plus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||| |||| ||||| || || || || || || ||| || ||| |
Sbjct 1914849 TTCTGGTAGTCGGACACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTC 1914908
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACG 132720
||| || || |||||||||| | ||||||| ||||| | |||| || | ||
Sbjct 1914909 TCCATGAAGTCGAAGGGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGA---GGGCCACC 1914965
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAG 132779
||||||| ||||||||| ||||| ||||| || ||||| | || || | | | |||||
Sbjct 1914966 AGCAGCCGGTCGGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATG-CCCAG 1915024
Query 132780 CAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838
||||| ||| || ||||| ||||| || || ||||||||| | || || ||| |
Sbjct 1915025 CAGACCGCAGGGG-AGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAA 1915083
Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAG 132898
| ||| || | | | ||||| | | | | ||| ||||| || || |
Sbjct 1915084 TCACGTCCTCGACAATCTTCTTGGAGGGCCGGTTCTCGAGGTGCGAGAACAGCAGACAGG 1915143
Query 132899 CAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGG 132958
||||||| |||| |||||||| | ||| ||||| |||||| ||| |||| |||||
Sbjct 1915144 CAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGG 1915203
Query 132959 GCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGC 133018
||||||| || || || |||||||| || |||| ||| || ||| || || |||| ||
Sbjct 1915204 GCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGC 1915263
Query 133019 CCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCC 133078
|||| ||||| || || || | || |||||||| || |||| || | | || |||||
Sbjct 1915264 CCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCGTCGTCGGAGATCC 1915323
Query 133079 AGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACA 133138
| |||||||| |||||||| | |||| ||| || || || ||||||||||| |||
Sbjct 1915324 ACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGCGTTGAAC- 1915382
Query 133139 AACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAATACATTTC 133196
| | || ||| || | || | | ||| |||||||| || ||| || ||||
Sbjct 1915383 -AGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGCGAGTAGGTTTC 1915441
Query 133197 CGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTG 133256
|||||| | ||||||||| ||| || |||||||| |||||| |||||| ||||
Sbjct 1915442 CGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCCTCGGGGGCCTG 1915501
Query 133257 CACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAA 133316
||| || | || ||||| ||||| || ||||||||||||||||| |||||| ||
Sbjct 1915502 CACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCAAA 1915561
Query 133317 AAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTC 133373
|||||||||||||| |||||| ||||||| || ||| | || |||||||||
Sbjct 1915562 GAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGGTTCTCCCAGTC 1915621
Query 133374 GCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTT 133433
|| | |||||||| || || | |||||| | ||||| |||||||||||||| || ||
Sbjct 1915622 GCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGCCTCGGCCTTCTT 1915681
Query 133434 GTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTC 133493
|||||| ||| || || || || ||||| || | ||||||||| ||| |||| ||
Sbjct 1915682 GTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAACCGCCGGTGGTTCTC 1915741
Query 133494 GCGCAACAGCGGCTC 133508
| |||||||||
Sbjct 1915742 CTTGAGCAGCGGCTC 1915756
>seq2
Length=2949780
Score = 132 bits (146), Expect = 5e-26
Identities = 167/227 (74%), Gaps = 2/227 (1%)
Strand=Plus/Plus
Query 38245 TGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCG 38304
||||||| || || || || || || ||||| ||||||||| |||| || ||| | |||
Sbjct 2456518 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 2456577
Query 38305 ACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
||| | | | |||| | || || |||| ||||| ||||| |||||| | |||||
Sbjct 2456578 ACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 2456636
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||||
Sbjct 2456637 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAAC 2456696
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| | || ||||| |||| |||||| | |||| ||
Sbjct 2456697 ATCCAGAAGGAGTCCACTCTGCACCTGGTTCTGCGTCTCCGAGGAGG 2456743
>seq7
Length=1109975
Score = 111 bits (122), Expect = 2e-19
Identities = 157/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301
||||||| || || || || || || || || || || |||||| | || || ||| |
Sbjct 1062554 AAATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTT 1062613
Query 38302 CCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | | | |||| | || || |||| ||||| |||||||||||| | |||
Sbjct 1062614 CCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGAC 1062672
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
|| ||||| || || | ||| || || ||||| || |||| || ||||| ||||||
Sbjct 1062673 CAGCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTAC 1062732
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
|||||||| ||||| | || || ||| | || |||||
Sbjct 1062733 AACATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCG 1062770
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172556165760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |