Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq9 154 6e-32 seq1 152 2e-31 seq2 113 2e-19 >seq9 Length=923155 Score = 154 bits (170), Expect = 6e-32 Identities = 456/696 (66%), Gaps = 9/696 (1%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 |||| | ||||| |||||||||||||| | || ||||| | | | || | | Sbjct 25316 AGCAGTAGGAATCGATCTTGGAACCACATACTCTTGTGTGGCCCACTTCGCCAACGACAG 25375 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032 || ||||| || || |||||||||||| |||| |||||||| | || ||||| Sbjct 25376 AGTCGAAATCATCGCCAATGACCAAGGAAACAGAACAACTCCTTCGTTTGTGGCCTTTAC 25435 Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAA 451091 || | ||| |||| | || | ||||| || | | | || | || | || Sbjct 25436 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCA-GGCAGCCATGAACCCTGCAA 25494 Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151 ||||||| | ||| || || || | ||||| || | || ||| || | || || | Sbjct 25495 ACACAGTYTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGA 25554 Query 451152 AAGAGAAAAAATTCTTTTCTT--ATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCA 451209 | || ||| ||| | | | ||| || | || | ||||||||| | || | Sbjct 25555 ATGACGCAAAGCACTTCCCCTTCAAGAT-TA-TCGATAAGGCTGGAAAGCCCAACATCGA 25612 Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269 ||| | | || ||||| || || || |||| |||||||| || || ||| |||| Sbjct 25613 AGTCGAGTTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCT 25672 Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329 || || ||||| || || || || ||| |||| | || | || || || || Sbjct 25673 CACGAAGATGAAGGAGACTGCCGAGGGATACCTTGGAACCAAGGTGAACGACGCTGTCAT 25732 Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389 ||| ||||||||||| ||||||||| | || || || || || || || ||||| | ||| Sbjct 25733 TACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCAGGTCTTAT 25792 Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449 |||||| | || |||| |||| || || || ||||| || || || | || || || Sbjct 25793 TGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCYTACGG 25852 Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 || | || || || || | || ||| | | | || ||| |||| ||||| Sbjct 25853 TCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATCTTCGATCTTGGAGGAGG 25909 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 |||| ||| ||| | || || ||||||||||| | ||||| || ||||| ||| Sbjct 25910 AACTTTCGATGTCTCTCTCCTGTCTATTGAAGATGGTATCTTTGAGGTCAAGGCCACCGC 25969 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 |||||| || ||||| || ||||| || |||| || Sbjct 25970 TGGTGACACCCATCTCGGTGGTGAGGACTTTGACAA 26005 >seq1 Length=4810746 Score = 152 bits (168), Expect = 2e-31 Identities = 282/413 (68%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || |||| | | || ||||| || || || |||| |||||| Sbjct 4780880 GGAAAGCCCAACATCGAAGTCGAATTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 4780821 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| |||| || || ||||| || || || || ||| |||| | Sbjct 4780820 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 4780761 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| ||||||||||| ||||||||| | || || || || || Sbjct 4780760 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCCACC 4780701 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | ||||||||| | || |||| |||| || || || ||||| || Sbjct 4780700 AAGGACGCTGGTCTTATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCC 4780641 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || || | || || || || | || || || || | || ||| | | | Sbjct 4780640 GCCGCAATTGCCTACGGTCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 4780584 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| |||| ||||||||| ||| ||| | || || ||||||||||| | ||| Sbjct 4780583 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTGTCTATTGAAGATGGTATCTTT 4780524 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| ||||||||| ||||| || ||||| || |||| || Sbjct 4780523 GAGGTCAAGGCCACCGCTGGTGATACCCATCTCGGTGGTGAGGACTTTGACAA 4780471 Score = 134 bits (148), Expect = 5e-26 Identities = 278/413 (67%), Gaps = 3/413 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 ||||||||| | || | || | | || ||||| || || || |||| |||||| Sbjct 4071662 GGAAAGCCCAACATCGAGGTCGAGTTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 4071603 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| |||| || || ||||| || || || || ||| |||| || Sbjct 4071602 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCCGAGGGATACCTTGGAACTAAG 4071543 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || | || || || ||||| || || ||||| || || ||| | || || ||||| || Sbjct 4071542 GTGAACGACGCTGTTATTACCGTCCCTGCTTACTTTAACGATTCTCAGCGACAAGCTACC 4071483 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || || || || | ||||| ||| | || || | |||| ||||| || ||||| || Sbjct 4071482 AAGGACGCCGGTCTCATTGCCGGTCTCAACGTCCAGAGAATCATTAACGAGCCTACCGCC 4071423 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 || ||| | || || || || | || || ||| | | || ||| || | | Sbjct 4071422 GCCGCTATTGCCTACGGTCTTGACAAG---AAGGAATCCGGCGAGCGAAACGTTCTCATC 4071366 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || || | || |||||||| |||| |||| | || || ||||||||||| | ||| Sbjct 4071365 TTCGACCTGGGAGGAGGAACCTTTGATGTTTCTCTCCTCTCCATTGAAGATGGTATCTTT 4071306 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| |||||| || ||||| || ||||| || |||| || Sbjct 4071305 GAGGTCAAGGCCACCGCTGGTGACACCCATCTCGGTGGTGAGGACTTTGACAA 4071253 Score = 86.0 bits (94), Expect = 2e-11 Identities = 180/267 (67%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 ||||| ||||| || ||||| ||||| || || || || || || ||||| || ||| Sbjct 2180542 ACTGTCCCCGCCTACTTCAACGATGCTCAGCGACAGGCCACCAAGGATGCCGGTATCATT 2180483 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 |||||| | || ||||| |||||| |||| || || || || || || | || || || Sbjct 2180482 GCTGGTCTGAACGTTCTGCGAATTGTTAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 2180423 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | | || | | || || || | ||| | || | ||| ||||||||||| Sbjct 2180422 CTGG----ACCACACCGAT--GACGAGAAGCAGATTGTTGTCTACGATCTTGGTGGAGGA 2180369 Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570 || ||| |||| | || || ||||| || || ||||| || || ||| Sbjct 2180368 ACCTTCGATGTTTCTCTGCTGTCCATTGAGTCCGGTGTCTTTGAGGTTCTTGCCACCGCC 2180309 Query 451571 GGTGATACTCATCTAGGAGGTGAAGAT 451597 ||||| || ||||| || ||||| ||| Sbjct 2180308 GGTGACACCCATCTTGGTGGTGAGGAT 2180282 >seq2 Length=2949780 Score = 113 bits (124), Expect = 2e-19 Identities = 201/293 (69%), Gaps = 3/293 (1%) Strand=Plus/Plus Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || |||||||| || || ||||| || || || ||||| ||| | || || || || || Sbjct 781033 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACC 781092 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 || ||||| || | ||||| ||| | || || | ||||| || || || ||||| || Sbjct 781093 AAGGATGCTGGTCTGATTGCCGGTCTTAACGTCCAGCGAATCATCAACGAGCCTACCGCT 781152 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492 ||||| | || || || || | || || || | | || ||| || | | Sbjct 781153 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCTGGTGAGCGAAACGTTCTCATC 781209 Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552 || ||| ||||||||||||| ||| |||| | || || ||||| || || | || Sbjct 781210 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTGCTGTCCATTGAGGACGGTATCTTC 781269 Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || ||||| ||| |||||| || ||||| || ||||| ||| | ||||| Sbjct 781270 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 781322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975717412758212