Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq9 154 6e-32
seq1 152 2e-31
seq2 113 2e-19
>seq9
Length=923155
Score = 154 bits (170), Expect = 6e-32
Identities = 456/696 (66%), Gaps = 9/696 (1%)
Strand=Plus/Plus
Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972
|||| | ||||| |||||||||||||| | || ||||| | | | || | |
Sbjct 25316 AGCAGTAGGAATCGATCTTGGAACCACATACTCTTGTGTGGCCCACTTCGCCAACGACAG 25375
Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTTTAC 451032
|| ||||| || || |||||||||||| |||| |||||||| | || |||||
Sbjct 25376 AGTCGAAATCATCGCCAATGACCAAGGAAACAGAACAACTCCTTCGTTTGTGGCCTTTAC 25435
Query 451033 GGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCAAAA 451091
|| | ||| |||| | || | ||||| || | | | || | || | ||
Sbjct 25436 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCA-GGCAGCCATGAACCCTGCAA 25494
Query 451092 ACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAA 451151
||||||| | ||| || || || | ||||| || | || ||| || | || || |
Sbjct 25495 ACACAGTYTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGA 25554
Query 451152 AAGAGAAAAAATTCTTTTCTT--ATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCA 451209
| || ||| ||| | | | ||| || | || | ||||||||| | || |
Sbjct 25555 ATGACGCAAAGCACTTCCCCTTCAAGAT-TA-TCGATAAGGCTGGAAAGCCCAACATCGA 25612
Query 451210 AGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCT 451269
||| | | || ||||| || || || |||| |||||||| || || ||| ||||
Sbjct 25613 AGTCGAGTTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCT 25672
Query 451270 TACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAAT 451329
|| || ||||| || || || || ||| |||| | || | || || || ||
Sbjct 25673 CACGAAGATGAAGGAGACTGCCGAGGGATACCTTGGAACCAAGGTGAACGACGCTGTCAT 25732
Query 451330 TACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATAT 451389
||| ||||||||||| ||||||||| | || || || || || || || ||||| | |||
Sbjct 25733 TACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCAGGTCTTAT 25792
Query 451390 TGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGG 451449
|||||| | || |||| |||| || || || ||||| || || || | || || ||
Sbjct 25793 TGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCYTACGG 25852
Query 451450 ACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509
|| | || || || || | || ||| | | | || ||| |||| |||||
Sbjct 25853 TCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATCTTCGATCTTGGAGGAGG 25909
Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569
|||| ||| ||| | || || ||||||||||| | ||||| || ||||| |||
Sbjct 25910 AACTTTCGATGTCTCTCTCCTGTCTATTGAAGATGGTATCTTTGAGGTCAAGGCCACCGC 25969
Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|||||| || ||||| || ||||| || |||| ||
Sbjct 25970 TGGTGACACCCATCTCGGTGGTGAGGACTTTGACAA 26005
>seq1
Length=4810746
Score = 152 bits (168), Expect = 2e-31
Identities = 282/413 (68%), Gaps = 3/413 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
||||||||| | || |||| | | || ||||| || || || |||| ||||||
Sbjct 4780880 GGAAAGCCCAACATCGAAGTCGAATTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 4780821
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||| |||| || || ||||| || || || || ||| |||| |
Sbjct 4780820 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCTGAGGGATACCTTGGAACCAAG 4780761
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | || || || ||||| ||||||||||| ||||||||| | || || || || ||
Sbjct 4780760 GTGAACGACGCTGTCATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCCACC 4780701
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| || || || | ||||||||| | || |||| |||| || || || ||||| ||
Sbjct 4780700 AAGGACGCTGGTCTTATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCC 4780641
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| || | || || || || | || || || || | || ||| | | |
Sbjct 4780640 GCCGCAATTGCCTACGGTCTTGACAA---GAAGGAGACTGGCGAGCGAAACGTGCTCATC 4780584
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| |||| ||||||||| ||| ||| | || || ||||||||||| | |||
Sbjct 4780583 TTCGATCTTGGAGGAGGAACTTTCGATGTCTCTCTTCTGTCTATTGAAGATGGTATCTTT 4780524
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| ||||||||| ||||| || ||||| || |||| ||
Sbjct 4780523 GAGGTCAAGGCCACCGCTGGTGATACCCATCTCGGTGGTGAGGACTTTGACAA 4780471
Score = 134 bits (148), Expect = 5e-26
Identities = 278/413 (67%), Gaps = 3/413 (1%)
Strand=Plus/Minus
Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252
||||||||| | || | || | | || ||||| || || || |||| ||||||
Sbjct 4071662 GGAAAGCCCAACATCGAGGTCGAGTTCAAGGGTGAGACCAAGGTCTTCACTCCCGAAGAA 4071603
Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312
|| || || ||| |||| || || ||||| || || || || ||| |||| ||
Sbjct 4071602 ATCTCCTCCATGATTCTCACAAAGATGAAGGAGACTGCCGAGGGATACCTTGGAACTAAG 4071543
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| | || || || ||||| || || ||||| || || ||| | || || ||||| ||
Sbjct 4071542 GTGAACGACGCTGTTATTACCGTCCCTGCTTACTTTAACGATTCTCAGCGACAAGCTACC 4071483
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| || || || | ||||| ||| | || || | |||| ||||| || ||||| ||
Sbjct 4071482 AAGGACGCCGGTCTCATTGCCGGTCTCAACGTCCAGAGAATCATTAACGAGCCTACCGCC 4071423
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
|| ||| | || || || || | || || ||| | | || ||| || | |
Sbjct 4071422 GCCGCTATTGCCTACGGTCTTGACAAG---AAGGAATCCGGCGAGCGAAACGTTCTCATC 4071366
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| || | || |||||||| |||| |||| | || || ||||||||||| | |||
Sbjct 4071365 TTCGACCTGGGAGGAGGAACCTTTGATGTTTCTCTCCTCTCCATTGAAGATGGTATCTTT 4071306
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| |||||| || ||||| || ||||| || |||| ||
Sbjct 4071305 GAGGTCAAGGCCACCGCTGGTGACACCCATCTCGGTGGTGAGGACTTTGACAA 4071253
Score = 86.0 bits (94), Expect = 2e-11
Identities = 180/267 (67%), Gaps = 6/267 (2%)
Strand=Plus/Minus
Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390
||||| ||||| || ||||| ||||| || || || || || || ||||| || |||
Sbjct 2180542 ACTGTCCCCGCCTACTTCAACGATGCTCAGCGACAGGCCACCAAGGATGCCGGTATCATT 2180483
Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450
|||||| | || ||||| |||||| |||| || || || || || || | || || ||
Sbjct 2180482 GCTGGTCTGAACGTTCTGCGAATTGTTAACGAGCCCACTGCCGCCGCCATTGCCTACGGT 2180423
Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510
|| | | || | | || || || | ||| | || | ||| |||||||||||
Sbjct 2180422 CTGG----ACCACACCGAT--GACGAGAAGCAGATTGTTGTCTACGATCTTGGTGGAGGA 2180369
Query 451511 ACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAAT 451570
|| ||| |||| | || || ||||| || || ||||| || || |||
Sbjct 2180368 ACCTTCGATGTTTCTCTGCTGTCCATTGAGTCCGGTGTCTTTGAGGTTCTTGCCACCGCC 2180309
Query 451571 GGTGATACTCATCTAGGAGGTGAAGAT 451597
||||| || ||||| || ||||| |||
Sbjct 2180308 GGTGACACCCATCTTGGTGGTGAGGAT 2180282
>seq2
Length=2949780
Score = 113 bits (124), Expect = 2e-19
Identities = 201/293 (69%), Gaps = 3/293 (1%)
Strand=Plus/Plus
Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372
|| |||||||| || || ||||| || || || ||||| ||| | || || || || ||
Sbjct 781033 GTCACTGATGCCGTCATCACTGTCCCTGCCTACTTCAACGATTCTCAGCGACAGGCCACC 781092
Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432
|| ||||| || | ||||| ||| | || || | ||||| || || || ||||| ||
Sbjct 781093 AAGGATGCTGGTCTGATTGCCGGTCTTAACGTCCAGCGAATCATCAACGAGCCTACCGCT 781152
Query 451433 GCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTA 451492
||||| | || || || || | || || || | | || ||| || | |
Sbjct 781153 GCTGCCATTGCCTACGGTCTTGACAAG---AAGGAGGCTGGTGAGCGAAACGTTCTCATC 781209
Query 451493 TTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTT 451552
|| ||| ||||||||||||| ||| |||| | || || ||||| || || | ||
Sbjct 781210 TTCGATCTTGGTGGAGGAACCTTCGATGTTTCTCTGCTGTCCATTGAGGACGGTATCTTC 781269
Query 451553 GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || ||||| ||| |||||| || ||||| || ||||| ||| | |||||
Sbjct 781270 GAGGTCAAGGCCACCGCTGGTGACACCCATCTTGGTGGTGAGGATTTCGATAA 781322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975717412758212
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |