Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=2682169 Score = 127 bits (140), Expect = 2e-24 Identities = 344/521 (66%), Gaps = 18/521 (3%) Strand=Plus/Plus Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054 || |||||||| |||||||||||||| || | || ||||| ||||| ||||| || Sbjct 1914864 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 1914923 Query 117055 GGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAGGAGACGATC 117107 || || | | ||| | | | || | || ||| | || || || || Sbjct 1914924 GGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGAGGGCCACC-------AGCAGCCGGTC 1914976 Query 117108 CGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGG 117167 | |||| |||||||||||| | |||| || | |||||| || | ||| || || Sbjct 1914977 GGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGACCGCAGGG 1915036 Query 117168 GAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGAT 117227 ||| ||||| | |||| | | ||| || |||| ||||| | | | | | || Sbjct 1915037 GAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGTCCTCGAC 1915096 Query 117228 AGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGT 117286 | | | | | ||| | || | | | || | ||| ||| |||||| ||| || Sbjct 1915097 AATCTTCTTGGAGGGCCGGTT-CTCGAGGTGCGAGAACAGCAGACAGGCAAAGTCCGTGT 1915155 Query 117287 GGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCC 117346 | |||||||| |||||||| || || || || |||||| ||||| ||||||||||| | Sbjct 1915156 GCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTC 1915215 Query 117347 GCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACG 117406 ||||||| | ||| | || | | || || |||||||| ||||| |||||||| | Sbjct 1915216 GCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTCCACGGCGG 1915275 Query 117407 CAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCATTTCATTGCC 117465 |||| |||| || |||||| | |||| | || | | || | | ||| || | ||| Sbjct 1915276 CAAAGGCAATGAGTCGCTCGCCAAAGGTG-GACTCGTCGTCGGAGATCCACTTGAGCGCC 1915334 Query 117466 CATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 117506 || | |||||||||| || || || | || | |||||| Sbjct 1915335 CAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGC 1915375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980512384360