Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 6e-16 seq7 93.3 3e-14 >seq2 Length=2949780 Score = 98.7 bits (108), Expect = 6e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||| ||| | ||| || ||||| ||||| ||||| ||||| |||| | || Sbjct 2456729 CAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTC 2456670 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || ||||| || || ||||| |||||||| | || | ||||||||||| Sbjct 2456669 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 2456610 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| |||||| | || | || | ||| || |||| ||| ||||| Sbjct 2456609 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGT 2456550 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCA 34980 || || || || ||||| |||||||| |||| Sbjct 2456549 CTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518 >seq7 Length=1109975 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/196 (71%), Gaps = 1/196 (1%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| |||||| |||| | || || ||||| || ||||| || Sbjct 1062746 TCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAG 1062687 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || ||||| |||||||| | || | ||||||||||| ||||| |||||| Sbjct 1062686 ATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTG 1062627 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||| || || | ||| || || || || || || ||||| ||| Sbjct 1062626 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACA 1062567 Query 34971 AAGATCTGCATATTCG 34986 || |||||||| |||| Sbjct 1062566 AAAATCTGCAT-TTCG 1062552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633445697592