Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq6 187 2e-42
seq10 87.8 1e-12
>seq6
Length=1650383
Score = 187 bits (206), Expect = 2e-42
Identities = 407/604 (67%), Gaps = 19/604 (3%)
Strand=Plus/Minus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
|||||| | |||||||| ||| ||| |||||||||||||||| ||||||| | |||
Sbjct 1315132 CTTCAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTC 1315073
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
|| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1315072 GCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAAT 1315013
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT- 29977
||| ||||| || || || |||| || | |||| |||||| ||||| ||||| |||
Sbjct 1315012 GTTGAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCG 1314953
Query 29978 ------CTCCGTCG-CT-------CACGTAAAACTGACACATGGTGTGGCACGGAGGAAG 30023
||||| || ||| || ||||| || | |||| || ||||| ||
Sbjct 1314952 GCCCCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAG 1314893
Query 30024 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 30083
|||||| | || || |||||||| || ||| ||||| || | ||| | ||
Sbjct 1314892 AGCCATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGG 1314833
Query 30084 GTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGT 30142
|||| || ||| ||| || | | | | ||||||||||| ||| || |||||
Sbjct 1314832 GTTGGTCTTGA-GAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGT 1314774
Query 30143 CTGCC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGT 30201
||| | || ||| ||||||| ||||| ||||| | ||| ||||| || ||||| |||
Sbjct 1314773 CTGTGTCGCA-GTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGT 1314715
Query 30202 CCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCG 30261
|||||||||||||| ||||| | | || ||| |||| ||| || |||| |||
Sbjct 1314714 CCCAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCG 1314655
Query 30262 TTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG 30321
|| |||||||||| | | ||| ||| |||| ||| || || | ||
Sbjct 1314654 TTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCC 1314595
Query 30322 ACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGG 30381
|| |||||||||||||| |||| ||| | | ||||||| ||| || ||||| ||
Sbjct 1314594 ACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGA 1314535
Query 30382 GGAA 30385
||||
Sbjct 1314534 GGAA 1314531
>seq10
Length=888286
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Minus
Query 52015 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52074
||||||||||| | || | ||| | | | ||| |||| || ||||||||||| |||
Sbjct 502258 TCGTCAAGGTGCGAATGCGAACCACAAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 502199
Query 52075 -TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTT-- 52129
|||||| || ||||| || || | | | | | ||| | ||||||||||| ||
Sbjct 502198 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGACATGCCGTTTT 502142
Query 52130 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCATCCAGGAT 52189
|| | || || || |||||||| |||||||||||||||||||| |||| || | ||
Sbjct 502141 CGGCC--GAGGGTGTCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 502084
Query 52190 GACCGT 52195
||||||
Sbjct 502083 GACCGT 502078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408617405778947
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |