Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1 165 5e-35 seq9 150 1e-30 >seq1 Length=4810746 Score = 165 bits (182), Expect = 5e-35 Identities = 551/848 (65%), Gaps = 12/848 (1%) Strand=Plus/Minus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||||||| | || || | || || ||||| ||| | ||||| |||||||| || Sbjct 4780538 GAAGATGGTATCTTTGAGGTCAAGGCCACCGCTGGTGATACCCATCTCGGTGGTGAGGAC 4780479 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || |||| || | || | |||| | || |||||| | || | || | Sbjct 4780478 TTTGACAACCGACTCGTGAACCAC--TTTGTTCAGGAGTTCAAGCGAAAGCACAAGAAGG 4780421 Query 475458 ATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 | | || || | | || | || | |||| || |||| |||||||| || ||||| Sbjct 4780420 ACATCTCGACCAACCAGCGA--GCTCTCCGACGACTGCGAACCGCTTGTGAGCGAGCTAA 4780363 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 |||| |||| || ||| || |||| || | ||||| |||| ||||| | || || || Sbjct 4780362 GCGAACTCTCTCGTCTTCTGCTCAGACATCCATTGAAATTGACTCTCTCTACGAGGGTAT 4780303 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 ||||| | || || || | || ||| || || | ||| |||||||| | Sbjct 4780302 TGATTTCTACACCTCCATCACCCGAGCCCGATTCGAGGAGCTCTGTCAGGATCTCTTCCG 4780243 Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695 | || |||| || ||||| | ||||| | || | || | ||||| | || Sbjct 4780242 AGGCACCCTTGAGCCTGTTGAGAAGGTTCTGAAGGACGCCAAGATGGACAAGGCTTCTGT 4780183 Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTC 475755 | | |||||||||||||| || || || || ||||||| || | |||| | | Sbjct 4780182 CAACGAAATTGTTCTTGTTGGTGGCTCTACTCGAATTCCCAAGGTCC-AGAAGCTCGTGT 4780124 Query 475756 ATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCAT 475814 | | | || || || || |||| || | | | || |||||||| |||||||| | Sbjct 4780123 CTGACTTCTTCAACGGCAAGGAGTTGAACCGATCTATCAACCCTGATGAGGCTGTTGCCT 4780064 Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAA-ACTAAATAAT 475873 | |||||||| ||||| || |||||| | || ||| | | | ||| | | Sbjct 4780063 ACGGAGCTGCCGTCCAGGCCGCTATTCTGTCTGGTGACACTTCCTCCTCTACTCAGGAC- 4780005 Query 475874 ATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATG 475933 ||| | ||| |||| || |||| || || | ||| | || || | ||| || ||||| Sbjct 4780004 ATTCTGCTTCTTGATGTTGCTCCTCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATG 4779945 Query 475934 ACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACT 475993 || || || || | |||| | | || || ||| || || | || ||||| Sbjct 4779944 ACCAAGCTCATCCCCCGAAACTCGACCATTCCCACCAAGAAGTCTGAGACCTTCTCCACC 4779885 Query 475994 TATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACT 476053 || |||| || || | ||| ||||| ||||||| ||||| || || Sbjct 4779884 TACGCTGACAACCAGCCCGGTGTTCTGATCCAGGTCTTTGAGGGTGAGCGAGCCCAGACC 4779825 Query 476054 AAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGA 476113 || || || |||| ||||| | ||| | ||| ||||| ||||||||||| |||| Sbjct 4779824 AAGGACAACAACATTCTTGGCAAGTTTGAGCTTTCTGGTATCCCTCCTGCTCCTCGAGGT 4779765 Query 476114 GTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 |||||||| ||||| || || || ||| | || || || || |||||||| ||| | ||| Sbjct 4779764 GTTCCTCAGATTGAGGTCACCTTCGATGTCGACGCCAACGGAATTCTTAACGTTTCCGCT 4779705 Query 476174 TGTGATAA 476181 ||| || Sbjct 4779704 GTTGAGAA 4779697 Score = 138 bits (152), Expect = 7e-27 Identities = 331/494 (67%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || ||||||||||| || || ||||||| || || | ||| | || || Sbjct 4781100 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 4781041 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || ||||| |||||||| ||| | || || || || |||| || Sbjct 4781040 CGACACTGAACGACTCATTGGTGATGCTGCCAAAAACCAGGCAGCCATGAACCCTGCAAA 4780981 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || || |||||||||| || ||||| || | ||||| Sbjct 4780980 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 4780921 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||| || | || || ||| | || || | ||| || || | || |||| Sbjct 4780920 TGACGCAAAGCACTTCCCCTTCAAGATTATCGATAAGGCTGGAAAGCCCAACATCGAAGT 4780861 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 ||| || | ||||| || || || | || ||| |||| || || ||| || | Sbjct 4780860 CGAATTCAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 4780803 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742 | || ||||| | || || ||| ||| |||||| |||| || | || || || Sbjct 4780802 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 4780746 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 ||||| ||||| || || || ||||||||||| || || || || || || || || Sbjct 4780745 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCTGGTCTT 4780686 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| || || || ||| | || || || || || || || |||||| |||| || Sbjct 4780685 ATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCAATTGCCTAC 4780626 Query 474863 GGTCTTGATAAGAA 474876 |||||||| ||||| Sbjct 4780625 GGTCTTGACAAGAA 4780612 >seq9 Length=923155 Score = 150 bits (166), Expect = 1e-30 Identities = 537/834 (64%), Gaps = 14/834 (2%) Strand=Plus/Plus Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399 ||||||||| | || || | || || ||||| || | ||||| |||||||| || Sbjct 25938 GAAGATGGTATCTTTGAGGTCAAGGCCACCGCTGGTGACACCCATCTCGGTGGTGAGGAC 25997 Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457 ||||| || |||| || | || | |||| | || || ||| | || | || | Sbjct 25998 TTTGACAACMGACTCGTGAACCAC--TTTGTTCAGGAGTTTAAGCGAAAGCACAAGAAGG 26055 Query 475458 ATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515 | | || || | | || | || | |||| || |||| || ||||| || ||||| Sbjct 26056 ACATCTCGACCAACCAGCGA--GCTCTCCGACGACTGCGAACCGCCTGTGAGCGAGCTAA 26113 Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575 |||| |||| || ||| || |||| ||| | ||||| |||| ||||| | || || || Sbjct 26114 GCGAACTCTCTCGTCTTCTGCTCAGACTTCCATTGAAATTGACTCTCTCTACGAGGGTAT 26173 Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635 ||||| | || || || | || ||| || || | ||| |||||||| || Sbjct 26174 TGATTTCTACACCTCCATCACCCGAGCCCGATTCGAGGAGCTCTGTCAGGATCTCTTCAG 26233 Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695 | || |||| || ||||| | ||||| | || | || | ||||| | || Sbjct 26234 AGGCACCCTTGAGCCTGTTGAGAAGGTTCTGAAGGACGCCAAGATGGACAAGGCCTCTGT 26293 Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTTT 475754 | | |||||||| ||||| || || || || |||| || || | |||| | | | Sbjct 26294 CAACGAAATTGTCCTTGTTGGTGGCTCTACTCGAATCCCCAAGGTCC-AGAAGCTYGTCT 26352 Query 475755 CATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCAT 475814 | | || || || || || | || | | || |||||||| |||||||| | Sbjct 26353 CTGACTTCTTCAACGGCAAGGAGCTGAACCGATCCATCAACCCTGATGAGGCTGTTGCTT 26412 Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAATCAGACGAGAAACTAAATAA 475872 | || ||||| ||||| || |||||| | || ||| || | | | | | | | Sbjct 26413 ACGGWGCTGCCGTCCAGGCCGCTATTCTGTCTGGTGACACTTCGTCCTCTACCCAGG--A 26470 Query 475873 TATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932 ||| | || |||| || |||| || || | ||| | || || | ||| || |||| Sbjct 26471 CATTCTGCTYCTTGATGTTGCTCCTCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTAT 26530 Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992 ||| || || || | |||| | | || || ||| || || | || || || Sbjct 26531 GACCAAGCTCATCCCCCGAAACTCGACCATTCCTACCAAGAAGTCTGAGACCTTCTCTAC 26590 Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052 ||| |||| || || | ||| ||||| ||||||| ||||| || || Sbjct 26591 CTATGCTGAYAACCAGCCTGGTGTTCTGATCCAGGTCTTTGAGGGTGAGCGAGCTCAGAC 26650 Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112 || || || |||| ||||| | ||| | ||| ||||| ||||||||||| |||| Sbjct 26651 CAAGGAYAACAACATTCTTGGTAAGTTTGAGCTTTCTGGTATCCCTCCTGCTCCTCGAGG 26710 Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166 ||||| || ||||| || || |||||| |||| || || ||||||||||| || Sbjct 26711 TGTTCCCCAGATTGAGGTCACCTTTGATGTTGACGCCAACGGTATTCTTAACGT 26764 Score = 143 bits (158), Expect = 2e-28 Identities = 369/554 (67%), Gaps = 12/554 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387 ||| | || || ||| | ||||| || ||| |||||| || || || || | | Sbjct 25317 GCAGTAGGAATCGATCTTGGAACCACATACTCTTGTGTGGCCCACTTCGCCAAC-GACAG 25375 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| ||||| || |||||||||||||| || |||||||| || || | ||| | ||||| Sbjct 25376 AGTCGAAATCATCGCCAATGACCAAGGAAACAGAACAACTCCTTCGTTTGTGGCCTTTAC 25435 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 || ||||||| || ||||| |||||||| || | || || || || |||| || Sbjct 25436 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 25495 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || | ||||| || || || |||||||||| || ||||| || | ||||| Sbjct 25496 CACAGTYTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 25555 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||| || | || || ||| | || || | ||| || || | || |||| Sbjct 25556 TGACGCAAAGCACTTCCCCTTCAAGATTATCGATAAGGCTGGAAAGCCCAACATCGAAGT 25615 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 | | || | ||||| || || || | || ||| |||| || || ||| || | Sbjct 25616 CGAGTTCAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 25673 Query 474686 GCCAAAATGAAACAAACCG-CGAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742 | || ||||| | || | |||| ||| |||||| |||| || | || || || Sbjct 25674 ACGAAGATGAAGGAGACTGCCGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 25730 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 ||||| ||||| || || || ||||||||||| || || || || || || || || Sbjct 25731 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCAGGTCTT 25790 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| || || || ||| | || || || || || || || ||||| |||| || Sbjct 25791 ATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCYTAC 25850 Query 474863 GGTCTTGATAAGAA 474876 |||||||| ||||| Sbjct 25851 GGTCTTGACAAGAA 25864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268177527100772