Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq1 165 5e-35
seq9 150 1e-30
>seq1
Length=4810746
Score = 165 bits (182), Expect = 5e-35
Identities = 551/848 (65%), Gaps = 12/848 (1%)
Strand=Plus/Minus
Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399
||||||||| | || || | || || ||||| ||| | ||||| |||||||| ||
Sbjct 4780538 GAAGATGGTATCTTTGAGGTCAAGGCCACCGCTGGTGATACCCATCTCGGTGGTGAGGAC 4780479
Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457
||||| || |||| || | || | |||| | || |||||| | || | || |
Sbjct 4780478 TTTGACAACCGACTCGTGAACCAC--TTTGTTCAGGAGTTCAAGCGAAAGCACAAGAAGG 4780421
Query 475458 ATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515
| | || || | | || | || | |||| || |||| |||||||| || |||||
Sbjct 4780420 ACATCTCGACCAACCAGCGA--GCTCTCCGACGACTGCGAACCGCTTGTGAGCGAGCTAA 4780363
Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575
|||| |||| || ||| || |||| || | ||||| |||| ||||| | || || ||
Sbjct 4780362 GCGAACTCTCTCGTCTTCTGCTCAGACATCCATTGAAATTGACTCTCTCTACGAGGGTAT 4780303
Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635
||||| | || || || | || ||| || || | ||| |||||||| |
Sbjct 4780302 TGATTTCTACACCTCCATCACCCGAGCCCGATTCGAGGAGCTCTGTCAGGATCTCTTCCG 4780243
Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695
| || |||| || ||||| | ||||| | || | || | ||||| | ||
Sbjct 4780242 AGGCACCCTTGAGCCTGTTGAGAAGGTTCTGAAGGACGCCAAGATGGACAAGGCTTCTGT 4780183
Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTC 475755
| | |||||||||||||| || || || || ||||||| || | |||| | |
Sbjct 4780182 CAACGAAATTGTTCTTGTTGGTGGCTCTACTCGAATTCCCAAGGTCC-AGAAGCTCGTGT 4780124
Query 475756 ATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCAT 475814
| | | || || || || |||| || | | | || |||||||| |||||||| |
Sbjct 4780123 CTGACTTCTTCAACGGCAAGGAGTTGAACCGATCTATCAACCCTGATGAGGCTGTTGCCT 4780064
Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAA-ACTAAATAAT 475873
| |||||||| ||||| || |||||| | || ||| | | | ||| | |
Sbjct 4780063 ACGGAGCTGCCGTCCAGGCCGCTATTCTGTCTGGTGACACTTCCTCCTCTACTCAGGAC- 4780005
Query 475874 ATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATG 475933
||| | ||| |||| || |||| || || | ||| | || || | ||| || |||||
Sbjct 4780004 ATTCTGCTTCTTGATGTTGCTCCTCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTATG 4779945
Query 475934 ACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACT 475993
|| || || || | |||| | | || || ||| || || | || |||||
Sbjct 4779944 ACCAAGCTCATCCCCCGAAACTCGACCATTCCCACCAAGAAGTCTGAGACCTTCTCCACC 4779885
Query 475994 TATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACT 476053
|| |||| || || | ||| ||||| ||||||| ||||| || ||
Sbjct 4779884 TACGCTGACAACCAGCCCGGTGTTCTGATCCAGGTCTTTGAGGGTGAGCGAGCCCAGACC 4779825
Query 476054 AAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGA 476113
|| || || |||| ||||| | ||| | ||| ||||| ||||||||||| ||||
Sbjct 4779824 AAGGACAACAACATTCTTGGCAAGTTTGAGCTTTCTGGTATCCCTCCTGCTCCTCGAGGT 4779765
Query 476114 GTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173
|||||||| ||||| || || || ||| | || || || || |||||||| ||| | |||
Sbjct 4779764 GTTCCTCAGATTGAGGTCACCTTCGATGTCGACGCCAACGGAATTCTTAACGTTTCCGCT 4779705
Query 476174 TGTGATAA 476181
||| ||
Sbjct 4779704 GTTGAGAA 4779697
Score = 138 bits (152), Expect = 7e-27
Identities = 331/494 (67%), Gaps = 10/494 (2%)
Strand=Plus/Minus
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || ||||||||||| || || ||||||| || || | ||| | || ||
Sbjct 4781100 AGTCGAAATCATCGCCAATGACCAGGGAAACCGAACAACTCCCTCGTTTGTGGCCTTCAC 4781041
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| ||| | || || || || |||| ||
Sbjct 4781040 CGACACTGAACGACTCATTGGTGATGCTGCCAAAAACCAGGCAGCCATGAACCCTGCAAA 4780981
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| || | |||||
Sbjct 4780980 CACAGTCTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 4780921
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | || || ||| | || || | ||| || || | || ||||
Sbjct 4780920 TGACGCAAAGCACTTCCCCTTCAAGATTATCGATAAGGCTGGAAAGCCCAACATCGAAGT 4780861
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
||| || | ||||| || || || | || ||| |||| || || ||| || |
Sbjct 4780860 CGAATTCAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 4780803
Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742
| || ||||| | || || ||| ||| |||||| |||| || | || || ||
Sbjct 4780802 ACAAAGATGAAGGAGACTGCTGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 4780746
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
||||| ||||| || || || ||||||||||| || || || || || || || ||
Sbjct 4780745 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCCACCAAGGACGCTGGTCTT 4780686
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| || || || ||| | || || || || || || || |||||| |||| ||
Sbjct 4780685 ATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCAATTGCCTAC 4780626
Query 474863 GGTCTTGATAAGAA 474876
|||||||| |||||
Sbjct 4780625 GGTCTTGACAAGAA 4780612
>seq9
Length=923155
Score = 150 bits (166), Expect = 1e-30
Identities = 537/834 (64%), Gaps = 14/834 (2%)
Strand=Plus/Plus
Query 475340 GAAGATGGTCTTTTCTCTGTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGAT 475399
||||||||| | || || | || || ||||| || | ||||| |||||||| ||
Sbjct 25938 GAAGATGGTATCTTTGAGGTCAAGGCCACCGCTGGTGACACCCATCTCGGTGGTGAGGAC 25997
Query 475400 TTTGATAATAGACTTGT--ATCATGGTGTGTTGAAGATTTCAAGAGGAAAAATAAAGTTG 475457
||||| || |||| || | || | |||| | || || ||| | || | || |
Sbjct 25998 TTTGACAACMGACTCGTGAACCAC--TTTGTTCAGGAGTTTAAGCGAAAGCACAAGAAGG 26055
Query 475458 ATCTTTCAAC--ATCTGCTAAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAA 475515
| | || || | | || | || | |||| || |||| || ||||| || |||||
Sbjct 26056 ACATCTCGACCAACCAGCGA--GCTCTCCGACGACTGCGAACCGCCTGTGAGCGAGCTAA 26113
Query 475516 GCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAAT 475575
|||| |||| || ||| || |||| ||| | ||||| |||| ||||| | || || ||
Sbjct 26114 GCGAACTCTCTCGTCTTCTGCTCAGACTTCCATTGAAATTGACTCTCTCTACGAGGGTAT 26173
Query 475576 TGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAG 475635
||||| | || || || | || ||| || || | ||| |||||||| ||
Sbjct 26174 TGATTTCTACACCTCCATCACCCGAGCCCGATTCGAGGAGCTCTGTCAGGATCTCTTCAG 26233
Query 475636 AAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGT 475695
| || |||| || ||||| | ||||| | || | || | ||||| | ||
Sbjct 26234 AGGCACCCTTGAGCCTGTTGAGAAGGTTCTGAAGGACGCCAAGATGGACAAGGCCTCTGT 26293
Query 475696 CCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAA-TGCTTT 475754
| | |||||||| ||||| || || || || |||| || || | |||| | | |
Sbjct 26294 CAACGAAATTGTCCTTGTTGGTGGCTCTACTCGAATCCCCAAGGTCC-AGAAGCTYGTCT 26352
Query 475755 CATCATATTTTAATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCAT 475814
| | || || || || || | || | | || |||||||| |||||||| |
Sbjct 26353 CTGACTTCTTCAACGGCAAGGAGCTGAACCGATCCATCAACCCTGATGAGGCTGTTGCTT 26412
Query 475815 ATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGT--CAATCAGACGAGAAACTAAATAA 475872
| || ||||| ||||| || |||||| | || ||| || | | | | | | |
Sbjct 26413 ACGGWGCTGCCGTCCAGGCCGCTATTCTGTCTGGTGACACTTCGTCCTCTACCCAGG--A 26470
Query 475873 TATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTAT 475932
||| | || |||| || |||| || || | ||| | || || | ||| || ||||
Sbjct 26471 CATTCTGCTYCTTGATGTTGCTCCTCTCTCTCTTGGTATCGAGACTGCTGGTGGTGTTAT 26530
Query 475933 GACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCAC 475992
||| || || || | |||| | | || || ||| || || | || || ||
Sbjct 26531 GACCAAGCTCATCCCCCGAAACTCGACCATTCCTACCAAGAAGTCTGAGACCTTCTCTAC 26590
Query 475993 TTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCAC 476052
||| |||| || || | ||| ||||| ||||||| ||||| || ||
Sbjct 26591 CTATGCTGAYAACCAGCCTGGTGTTCTGATCCAGGTCTTTGAGGGTGAGCGAGCTCAGAC 26650
Query 476053 TAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGG 476112
|| || || |||| ||||| | ||| | ||| ||||| ||||||||||| ||||
Sbjct 26651 CAAGGAYAACAACATTCTTGGTAAGTTTGAGCTTTCTGGTATCCCTCCTGCTCCTCGAGG 26710
Query 476113 AGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGT 476166
||||| || ||||| || || |||||| |||| || || ||||||||||| ||
Sbjct 26711 TGTTCCCCAGATTGAGGTCACCTTTGATGTTGACGCCAACGGTATTCTTAACGT 26764
Score = 143 bits (158), Expect = 2e-28
Identities = 369/554 (67%), Gaps = 12/554 (2%)
Strand=Plus/Plus
Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGT-TTGGCAAAATGGTAA 474387
||| | || || ||| | ||||| || ||| |||||| || || || || | |
Sbjct 25317 GCAGTAGGAATCGATCTTGGAACCACATACTCTTGTGTGGCCCACTTCGCCAAC-GACAG 25375
Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447
||| ||||| || |||||||||||||| || |||||||| || || | ||| | |||||
Sbjct 25376 AGTCGAAATCATCGCCAATGACCAAGGAAACAGAACAACTCCTTCGTTTGTGGCCTTTAC 25435
Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507
|| ||||||| || ||||| |||||||| || | || || || || |||| ||
Sbjct 25436 CGACACTGAACGACTCATTGGTGATGCTGCCAAGAACCAGGCAGCCATGAACCCTGCAAA 25495
Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567
|| | ||||| || || || |||||||||| || ||||| || | |||||
Sbjct 25496 CACAGTYTTTGACGCCAAGCGACTGATTGGTCGAAAGTTTGACGACCCTGAGGTCCAGAA 25555
Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626
||| || | || || ||| | || || | ||| || || | || ||||
Sbjct 25556 TGACGCAAAGCACTTCCCCTTCAAGATTATCGATAAGGCTGGAAAGCCCAACATCGAAGT 25615
Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685
| | || | ||||| || || || | || ||| |||| || || ||| || |
Sbjct 25616 CGAGTTCAAG--GGTGAGACCAAGGTCTTCACTCCCGAAGAAATCTCCTCCATGATTCTC 25673
Query 474686 GCCAAAATGAAACAAACCG-CGAGCTCATATCTTGGA--CAAGAAGTAACTGATGCAGTA 474742
| || ||||| | || | |||| ||| |||||| |||| || | || || ||
Sbjct 25674 ACGAAGATGAAGGAGACTGCCGAG-GGATACCTTGGAACCAAG--GTGAACGACGCTGTC 25730
Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802
||||| ||||| || || || ||||||||||| || || || || || || || ||
Sbjct 25731 ATTACCGTTCCCGCTTACTTCAATGATTCTCAGCGACAGGCTACCAAGGACGCAGGTCTT 25790
Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862
||||| || || || ||| | || || || || || || || ||||| |||| ||
Sbjct 25791 ATTGCTGGCCTGAACGTTCAGAGAATCATCAACGAGCCTACCGCCGCCGCCATTGCYTAC 25850
Query 474863 GGTCTTGATAAGAA 474876
|||||||| |||||
Sbjct 25851 GGTCTTGACAAGAA 25864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3268177527100772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |