Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=2682169 Score = 127 bits (140), Expect = 2e-24 Identities = 344/521 (66%), Gaps = 18/521 (3%) Strand=Plus/Minus Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055 |||||| | || | || || || |||||||||| | ||||| | || ||| | | Sbjct 1915375 GCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCC 1915316 Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114 || | | || | |||| | |||||| || |||| ||||| |||||||| ||||| Sbjct 1915315 GACGACGAGTC-CACCTTTGGCGAGCGACTCATTGCCTTTGCCGCCGTGGAGGGCATCTT 1915257 Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 |||||||| || || | | || | ||| | |||||||| ||||||||||| ||||| Sbjct 1915256 TTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCT 1915197 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234 |||||| || || || || |||||||| |||||||| ||| ||| |||||| Sbjct 1915196 GACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACGGACTTTGCCTGTCT 1915137 Query 65235 GCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293 ||| ||| | || | | | || | ||| | | | | | || | | | | | | Sbjct 1915136 GCTGTTCTCGCACCTCGAG-AACCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCG 1915078 Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353 |||| |||| || ||| | | |||| | ||||| ||||| || ||| | || | Sbjct 1915077 AGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCA 1915018 Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413 ||||| | || |||| | |||||||||||| |||| | || || || || | Sbjct 1915017 TGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGGCTGCT-------G 1914965 Query 65414 TTGG-----GGTGCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAAC 65466 ||| || | || | | | ||| | | || || || ||||| ||||| ||| Sbjct 1914964 GTGGCCCTCGGAAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAAC 1914905 Query 65467 ATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507 || || | || |||||||||||||| |||||||| || Sbjct 1914904 ATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1914864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569309172320