Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 2e-24
>seq3
Length=2682169
Score = 127 bits (140), Expect = 2e-24
Identities = 344/521 (66%), Gaps = 18/521 (3%)
Strand=Plus/Minus
Query 64996 GCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC 65055
|||||| | || | || || || |||||||||| | ||||| | || ||| | |
Sbjct 1915375 GCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATCTCC 1915316
Query 65056 -ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTT 65114
|| | | || | |||| | |||||| || |||| ||||| |||||||| |||||
Sbjct 1915315 GACGACGAGTC-CACCTTTGGCGAGCGACTCATTGCCTTTGCCGCCGTGGAGGGCATCTT 1915257
Query 65115 CTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174
|||||||| || || | | || | ||| | |||||||| ||||||||||| |||||
Sbjct 1915256 TTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCT 1915197
Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGA 65234
|||||| || || || || |||||||| |||||||| ||| ||| ||||||
Sbjct 1915196 GACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACGGACTTTGCCTGTCT 1915137
Query 65235 GCTCTTCAAG-ACTTTGCGTAATAGACCCACTACCGAAACTATCCACGCCATCGTGAAAG 65293
||| ||| | || | | | || | ||| | | | | | || | | | | | |
Sbjct 1915136 GCTGTTCTCGCACCTCGAG-AACCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCG 1915078
Query 65294 AGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTA 65353
|||| |||| || ||| | | |||| | ||||| ||||| || ||| | || |
Sbjct 1915077 AGGCCGTTGGCATCGAGCAGGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCA 1915018
Query 65354 TGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAG 65413
||||| | || |||| | |||||||||||| |||| | || || || || |
Sbjct 1915017 TGAACGCCAAGCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGGCTGCT-------G 1914965
Query 65414 TTGG-----GGTGCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAAC 65466
||| || | || | | | ||| | | || || || ||||| ||||| |||
Sbjct 1914964 GTGGCCCTCGGAAACTCCAAGGTCTACAACTCCACCAACCCCTTCGACTTCATGGAGAAC 1914905
Query 65467 ATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGT 65507
|| || | || |||||||||||||| |||||||| ||
Sbjct 1914904 ATCTCGCTGGCCGGCAAGACCAACTTCTTCGAGAAGCGGGT 1914864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569309172320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |