Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq2 109 2e-18
seq10 96.9 1e-14
seq3 86.0 2e-11
>seq2
Length=2949780
Score = 109 bits (120), Expect = 2e-18
Identities = 563/882 (64%), Gaps = 21/882 (2%)
Strand=Plus/Plus
Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689
||| || |||||||| ||||||||||| || |||||| || || | |||||||||||
Sbjct 79789 GTACTCGACAATCTCGCAGCACAGGTTGGACGACTTGATAGTACCCAGGTTCTTCTGGTT 79848
Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749
|| || | ||| || | |||||||| || ||| | ||| | || | ||| ||||
Sbjct 79849 GGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTGCCGGACTCGGTCTGACA 79908
Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCG 155808
||||||||| | ||| || | |||| | | | | || | || ||| |||
Sbjct 79909 GTCCAGAATGTGGTACCACAGCTTCTGGGCGGGGA-TGGTTCGTCGGCCTCGGCCCTCCT 79967
Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868
||| || | | |||||| | | || || ||||| ||| || || || |
Sbjct 79968 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGACGTCATCAAGGCCGGGAC 80027
Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927
||| | |||||| | || | || | | | | | | || |||||||| || |
Sbjct 80028 ACTCGTTGGGGCACATGAGGGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGG 80086
Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985
|| ||| | ||| ||| || || | || | || |||||| | ||||| |
Sbjct 80087 TCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGC--TCGAATCTCCTCCTTACCGTGGT 80144
Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045
|||| || ||||| |||| || | || || |||||||| ||||| ||||
Sbjct 80145 TCTTTCGCAGCTCGCAGAACTCGAAGACGTCGTCGTGCCAGGGCTCCAGGTACATGGCAA 80204
Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102
| || | | | | ||||| ||||| || || || ||||| || || ||| | || |
Sbjct 80205 AGGCTCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCGGTGTTGTTGTACACTC 80264
Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGAT 156161
||||| || | ||||| ||||| || || |||||||| ||| || | || || |
Sbjct 80265 GCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCAGCG-ATGTAGGAGCCGGTA 80323
Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221
| || | || || || || ||||| || || | | || ||||| |||| ||
Sbjct 80324 GCTCGGATGTTGTGGATGGACAGACCAATGCCTCCAGCGGACTTGGAAATGAGAGCACAA 80383
Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281
||| | ||| | | | || || || || || || || | ||| | || | |||
Sbjct 80384 GTCTTGAGAGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACGAGGAAACAC 80443
Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341
|| | || || | || || || |||||| | || || || | ||||| | ||
Sbjct 80444 GACGACATCTGGGGCTGGGGGGTGCCTGCGTTGTACAGGGTGGGAGAAGCATGGGTGAAG 80503
Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG--AT-TAGAC-CCGTG 156397
||||| | |||||| || | ||| ||||| || ||| | || | | | |||||
Sbjct 80504 TACTTCTGAGACATGTAGTTGTAGGTCTCGATA----GCTCGGGCAATGTCGTCGCCGTG 80559
Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457
|||| || ||| || | ||| ||| |||||||| | ||| ||| | || | |
Sbjct 80560 GATACCGACAGACACTCGCATGATCATCTGCTGAGGTCTCTCAGCAACGGCACCGTTGAC 80619
Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499
|||||| |||||||| || |||||||| || || || || ||
Sbjct 80620 TCGCAGCAGGTATGCTCGCTCCAGAGTCTTGAAGCCAAAGTA 80661
>seq10
Length=888286
Score = 96.9 bits (106), Expect = 1e-14
Identities = 128/177 (72%), Gaps = 8/177 (5%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
|| ||||| | |||||||||||||||||||||||| ||||| || |||||||| || |||
Sbjct 501718 GCTCCGTGGGCAATCATACAATCACGCTCCATTTCTCCGAATCGCAGACCACCCTCTCGA 501777
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600
| | ||| ||| | ||||| | || ||| | | |||||| | | |||||
Sbjct 501778 GATCGACCTTCGACGGGCTGTCTGGTCAGAATCTGAACAGGACCTCGAGCTCGAGCG--- 501834
Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657
|| ||| |||| |||||||| |||||||||||| | | |||||| | |||
Sbjct 501835 -TGAATCTTGTCATCCACCATATGTCGCAGACGCTGGTAGTAAGTGGGACCCAGGAA 501890
>seq3
Length=2682169
Score = 86.0 bits (94), Expect = 2e-11
Identities = 186/276 (67%), Gaps = 8/276 (3%)
Strand=Plus/Plus
Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631
||||||| | ||||| | ||| |||||||| || ||||| | || || || ||
Sbjct 1011824 TCTTCCAGAGCCTTGACCAGACGTCGCTGAATGTATCCAGTCTCGGCGGTCTTGACGGCG 1011883
Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691
|||||||| ||||| | || ||| |||| || |||||||| | ||| | || ||
Sbjct 1011884 GTATCAATCAGACCCTCTCGTCCAGCCATGGCGTGGAAGAAGAACTCCTGGGGGGTCAGG 1011943
Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751
|| | | | ||| |||||| ||| || | |||||| || | |||| ||||
Sbjct 1011944 CCTCGCAGGTACGAGTTCTCAATGAATCCCTTGGACTCGGGAGAGTAGTCGTCCTTGCAG 1012003
Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811
|| || |||||||| | || || | || | || | ||||| || || || |||||
Sbjct 1012004 AAATGAGGCAGGGTTCGGTCAGCAAAACCAAAGGGTACTCGCTTACCCTCGACCATCTGC 1012063
Query 302812 TGTCC----CAGGCACGAAATCATCTGCGAAATATT 302843
|| || ||||| ||| |||||||||||| ||
Sbjct 1012064 TGGCCGACACAGGC-CGA---CATCTGCGAAATGTT 1012095
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471816864551143
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |