Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq2 109 2e-18 seq10 96.9 1e-14 seq3 86.0 2e-11 >seq2 Length=2949780 Score = 109 bits (120), Expect = 2e-18 Identities = 563/882 (64%), Gaps = 21/882 (2%) Strand=Plus/Plus Query 155630 GTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTT 155689 ||| || |||||||| ||||||||||| || |||||| || || | ||||||||||| Sbjct 79789 GTACTCGACAATCTCGCAGCACAGGTTGGACGACTTGATAGTACCCAGGTTCTTCTGGTT 79848 Query 155690 AGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGC 155749 || || | ||| || | |||||||| || ||| | ||| | || | ||| |||| Sbjct 79849 GGACTTTCGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTGCCGGACTCGGTCTGACA 79908 Query 155750 GTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGT-TGTATCTGCCTTCCG 155808 ||||||||| | ||| || | |||| | | | | || | || ||| ||| Sbjct 79909 GTCCAGAATGTGGTACCACAGCTTCTGGGCGGGGA-TGGTTCGTCGGCCTCGGCCCTCCT 79967 Query 155809 ACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 ||| || | | |||||| | | || || ||||| ||| || || || | Sbjct 79968 TCTCGTACTGCTCGTACAGCTGCTTGAACTCGTCGCCGTAGACGTCATCAAGGCCGGGAC 80027 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGAT-TACACGCTCCATAAATACA 155927 ||| | |||||| | || | || | | | | | | || |||||||| || | Sbjct 80028 ACTCGTTGGGGCACATGAGGGTCC-ACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGG 80086 Query 155928 TCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGA--CTCCTCATCGCCGTGAT 155985 || ||| | ||| ||| || || | || | || |||||| | ||||| | Sbjct 80087 TCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGC--TCGAATCTCCTCCTTACCGTGGT 80144 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || ||||| |||| || | || || |||||||| ||||| |||| Sbjct 80145 TCTTTCGCAGCTCGCAGAACTCGAAGACGTCGTCGTGCCAGGGCTCCAGGTACATGGCAA 80204 Query 156046 A-ACTACCATT--CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | || | | | | ||||| ||||| || || || ||||| || || ||| | || | Sbjct 80205 AGGCTCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCGGTGTTGTTGTACACTC 80264 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCC-GCGAATATGCGAACCAGAT 156161 ||||| || | ||||| ||||| || || |||||||| ||| || | || || | Sbjct 80265 GCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCAGCG-ATGTAGGAGCCGGTA 80323 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221 | || | || || || || ||||| || || | | || ||||| |||| || Sbjct 80324 GCTCGGATGTTGTGGATGGACAGACCAATGCCTCCAGCGGACTTGGAAATGAGAGCACAA 80383 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281 ||| | ||| | | | || || || || || || || | ||| | || | ||| Sbjct 80384 GTCTTGAGAGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACGAGGAAACAC 80443 Query 156282 GAACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAA 156341 || | || || | || || || |||||| | || || || | ||||| | || Sbjct 80444 GACGACATCTGGGGCTGGGGGGTGCCTGCGTTGTACAGGGTGGGAGAAGCATGGGTGAAG 80503 Query 156342 TACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAG--AT-TAGAC-CCGTG 156397 ||||| | |||||| || | ||| ||||| || ||| | || | | | ||||| Sbjct 80504 TACTTCTGAGACATGTAGTTGTAGGTCTCGATA----GCTCGGGCAATGTCGTCGCCGTG 80559 Query 156398 AATACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAAT 156457 |||| || ||| || | ||| ||| |||||||| | ||| ||| | || | | Sbjct 80560 GATACCGACAGACACTCGCATGATCATCTGCTGAGGTCTCTCAGCAACGGCACCGTTGAC 80619 Query 156458 TCGCAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 |||||| |||||||| || |||||||| || || || || || Sbjct 80620 TCGCAGCAGGTATGCTCGCTCCAGAGTCTTGAAGCCAAAGTA 80661 >seq10 Length=888286 Score = 96.9 bits (106), Expect = 1e-14 Identities = 128/177 (72%), Gaps = 8/177 (5%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 || ||||| | |||||||||||||||||||||||| ||||| || |||||||| || ||| Sbjct 501718 GCTCCGTGGGCAATCATACAATCACGCTCCATTTCTCCGAATCGCAGACCACCCTCTCGA 501777 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACC----GATGGAGCGGCT 251600 | | ||| ||| | ||||| | || ||| | | |||||| | | ||||| Sbjct 501778 GATCGACCTTCGACGGGCTGTCTGGTCAGAATCTGAACAGGACCTCGAGCTCGAGCG--- 501834 Query 251601 ATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAA 251657 || ||| |||| |||||||| |||||||||||| | | |||||| | ||| Sbjct 501835 -TGAATCTTGTCATCCACCATATGTCGCAGACGCTGGTAGTAAGTGGGACCCAGGAA 501890 >seq3 Length=2682169 Score = 86.0 bits (94), Expect = 2e-11 Identities = 186/276 (67%), Gaps = 8/276 (3%) Strand=Plus/Plus Query 302572 TCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCT 302631 ||||||| | ||||| | ||| |||||||| || ||||| | || || || || Sbjct 1011824 TCTTCCAGAGCCTTGACCAGACGTCGCTGAATGTATCCAGTCTCGGCGGTCTTGACGGCG 1011883 Query 302632 GTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGC 302691 |||||||| ||||| | || ||| |||| || |||||||| | ||| | || || Sbjct 1011884 GTATCAATCAGACCCTCTCGTCCAGCCATGGCGTGGAAGAAGAACTCCTGGGGGGTCAGG 1011943 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTA 302751 || | | | ||| |||||| ||| || | |||||| || | |||| |||| Sbjct 1011944 CCTCGCAGGTACGAGTTCTCAATGAATCCCTTGGACTCGGGAGAGTAGTCGTCCTTGCAG 1012003 Query 302752 AAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGC 302811 || || |||||||| | || || | || | || | ||||| || || || ||||| Sbjct 1012004 AAATGAGGCAGGGTTCGGTCAGCAAAACCAAAGGGTACTCGCTTACCCTCGACCATCTGC 1012063 Query 302812 TGTCC----CAGGCACGAAATCATCTGCGAAATATT 302843 || || ||||| ||| |||||||||||| || Sbjct 1012064 TGGCCGACACAGGC-CGA---CATCTGCGAAATGTT 1012095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816864551143