Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2 152 5e-32 >seq2 Length=2949780 Score = 152 bits (168), Expect = 5e-32 Identities = 1051/1669 (63%), Gaps = 40/1669 (2%) Strand=Plus/Plus Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417 |||||||||||||||||||| || || || | | || || | | || || || Sbjct 79028 ATCTCCCACACGGTCTTGTACAGGTCCTTGATCTCCTGGGGGATGTTGGGGATGTTCTGC 79087 Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTTG 138477 | | |||||| | || | ||| || || ||||| || || |||| | || Sbjct 79088 ACGGATCCGTTGTCGGCCACGATTCGGTTCTTCATGGTCTCATTCCACAGTCCGACCTCA 79147 Query 138478 ATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACGA 138537 | || ||| || | ||| | ||| | | ||| || || || || | ||||| ||| Sbjct 79148 ACCAGGTCCTTGAGCAGCCAGGGGTTGACAATCTGGAACTCGCCAGCAAGCACTCGTCGA 79207 Query 138538 ACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTG 138597 |||||||||| |||| | ||||| || | |||||| || |||||||| | ||| Sbjct 79208 GAGTAAATGTTGGAGGTGTAGGGCTCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTG 79267 Query 138598 GTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGT 138657 | ||||| |||||| ||||||| || || || || | ||| | |||| Sbjct 79268 GAGGCGGTGGGCATGGGGGCCACCAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTG 79327 Query 138658 TCCTTGAG--CGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715 ||||||| || | ||| ||||| | ||| || | |||||||| ||| ||| Sbjct 79328 GCCTTGAGATCGTC--CCACTCCCAGAGCTCGGAGGGAGTCACGTTCCACAGATCAAACT 79385 Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCG 138775 | | ||| || ||| ||| | | | | ||||| | || ||| | | Sbjct 79386 GCAGGTCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGG 79445 Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835 ||| ||||| | ||||| | || || | ||| || || ||| ||||| |||| Sbjct 79446 CCATCTCGTAGGAGGCCTCAACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGA 79505 Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895 || |||||| || ||| | || | ||||| | |||| | ||| ||||| | Sbjct 79506 GCTTCTTGGCCTCCTCGGACTCAAAGGGAAGTCGGAGGGCCATGAAAGTGTCAGCCAGAC 79565 Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAG 138955 | || || |||| | | || || || |||| || ||| || || | || | Sbjct 79566 CCTGGACACCCAGAGCAATGGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGGACGG 79625 Query 138956 GATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCT 139015 | || |||||| |||||||| ||| | |||||||| | |||||| | ||| | Sbjct 79626 GGTAGTAGTTTCGGTCGATGATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATAT-CG 79684 Query 139016 TTAATCGT-TCAAAATCGTATGTGCCCCCGTTG---TCGTCGACGACGTCGACAAATTTG 139071 | | | | | || ||||| | | |||| ||||| ||| || |||||| | Sbjct 79685 TGCAGCTTCTTGAAGTCGTA---GAACGAGTTGGTCTCGTCT-CGA-GT-GACAAAA--G 79736 Query 139072 TTGACACA--AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGG-GTCGCTGTATTCG 139128 | | || ||| ||||| | |||||| || ||||| ||||| || | || ||| ||| Sbjct 79737 TAGGCAGCGCAATGGAGGCCAGGTTGCAGACGGCCACCTCGTCAGGAGACGA-GTACTCG 79795 Query 139129 ACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTT 139188 ||||| ||| |||| || ||||||| ||||| | || | || ||| ||| Sbjct 79796 ACAATCTCGCAGCACAGGTTGGACGACTTGATAGTACCCAGGTTCTTCTGGTTGGACTTT 79855 Query 139189 CGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATA 139248 ||||| || | || ||||| ||||| | || |||| | || || || | | Sbjct 79856 CGGTTGCAGGAGTCCTTGTAGAGCATGAAGGGGTTGCCGGACTCGGTCTGACAGTCCAGA 79915 Query 139249 ATGAATTTGAACAAGTCCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTAC 139308 ||| | ||| | | || | || || | | | || ||||||| Sbjct 79916 ATGTGGTACCACAGCTTCTGGGCGGGGATGGTTCGTCGGCCTCGGCCCTCCTTCTCGTAC 79975 Query 139309 TTTTCGTAGAGTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTC 139367 | ||||| || | | ||| |||| | |||||| ||||| ||| || |||||| || Sbjct 79976 TGCTCGTACAGCTGCTTGAACTCGT-CGCCGTAGACGTCATCAAGGCCGGGACACTCGTT 80034 Query 139368 AGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAAT 139427 || |||||||| | ||| || ||||| || ||| ||| ||||||||| || || || Sbjct 80035 GGGGCACATGAGGGTCCACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGAT 80094 Query 139428 CCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCT--TCCGAACCCATGTTACGTTTC 139485 ||| | ||| | | || ||| || || || |||| ||| ||| ||| | | Sbjct 80095 CCAGAGAGCCAGGAACAGATCTCGGGC--TCGAATCTCCTCCTTACCGTGGTTCTTTCGC 80152 Query 139486 ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCT 139545 | | ||| || || ||||| ||||||| || ||||| || ||||| | || || Sbjct 80153 AGCTCGCAGAACTCGAAGACGTCGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCG 80212 Query 139546 TTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATC 139602 || ||| || || || ||||||| ||| | | || ||| | || |||| ||| Sbjct 80213 GGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATG 80272 Query 139603 GGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG--GGACTGTTGCGAGCTCGGA 139660 ||| | | |||| | | ||||||||||| | | |||| ||| | | |||||||| Sbjct 80273 GGCACGATACCGTTGGAGGTTCCGTTGGTTCCAGCGATGTAGGA--GCCGGTAGCTCGGA 80330 Query 139661 CGTCATGTACATTGATG--CCGATTCCGCCGCCAAATTTGGATATTAAAACGCAA-TCGC 139717 || ||| || || || || || || | | ||||| || | | | ||| || Sbjct 80331 TGT--TGTGGATGGACAGACCAATGCCTCCAGCGGACTTGGAAATGAGAGCACAAGTCTT 80388 Query 139718 GTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACG 139777 | | || ||||| || || ||| |||||||| ||| |||| || || || |||| Sbjct 80389 GAGA-GTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGACG 80447 Query 139778 AAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTT 139837 | | || || | ||||| || |||| || ||| || || ||||| | Sbjct 80448 ACATCTGGGGCTGGGGGGTGCCTGCGTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACT 80507 Query 139838 GTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGA 139897 | ||||| | | ||| || ||||| || | |||| || ||||||||||||| Sbjct 80508 TCTGAGACATGTAGTTGTAGGTCTCGATAGCTCGGGCAATGTCGTCGCCGTGGATACCGA 80567 Query 139898 CAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCA 139957 |||| |||||||| | ||| || || | || || || || || | || | || Sbjct 80568 CAGACACTCGCATGATCATCTGCTGAGGTCTCTCAGCAACGGCACCGTTGACTCGCAGCA 80627 Query 139958 GATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 | || | ||| || |||||| |||||||||| | ||| |||| || Sbjct 80628 GGTATGCTCGCTCCAGAGTCTTGAAGCCAAAGTAGTTGTAGGTGAAGTC 80676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897380674920