Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2 116 2e-21 seq7 114 8e-21 >seq2 Length=2949780 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||||||| | ||| ||||||||| ||||| ||||| || || | || | || Sbjct 2456729 CAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTTCGGCCGTC 2456670 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| ||||| |||||||| | || | ||||||||||| Sbjct 2456669 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 2456610 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || || | ||| ||||| Sbjct 2456609 CTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCGAGGGTGATGGT 2456550 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCA 34976 ||| || || |||||||| |||||||| |||| Sbjct 2456549 CTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518 >seq7 Length=1109975 Score = 114 bits (126), Expect = 8e-21 Identities = 153/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| || || || | ||| ||||||||| ||||| ||||| || ||| | || | || Sbjct 1062768 CAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTTCGGCCGTC 1062709 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| ||||| |||||||| | || | ||||||||||| Sbjct 1062708 CTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 1062649 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | || | || | ||| || |||| ||| || || Sbjct 1062648 CTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGT 1062589 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || || |||||||| ||||| |||||||| Sbjct 1062588 CTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1062556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692645194141