Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq2 187 2e-42
seq3 129 6e-25
>seq2
Length=2949780
Score = 187 bits (206), Expect = 2e-42
Identities = 966/1516 (64%), Gaps = 49/1516 (3%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951
||||| | || |||||||| || ||||| |||| |||| || | ||| ||| | ||
Sbjct 79172 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTC-GAGAGTAAATGTTGGAGGTGTAGGG 79230
Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011
||| ||| |||| || ||| | || || | |||| ||||| |||||| |||||
Sbjct 79231 CTCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCAC 79290
Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071
|| || || ||||||| ||| | ||| ||| |||| | | | ||| |||||
Sbjct 79291 CAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCA 79350
Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAG--CACTCCTCGACTGGCGGGA 147129
| | ||||| ||||||||||||| || |||| || ||| | | || ||| |||
Sbjct 79351 GAGCTCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGGTCACCCTTGGA--GGCAGGA 79408
Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189
||| ||| || |||| ||||| | |||| || || ||||| |
Sbjct 79409 GAGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGGCCATCTCGTAGGAGGCCTCAACG 79468
Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249
||||| | ||| ||||| ||| ||| || |||| || | || || ||| |||
Sbjct 79469 GCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCA 79528
Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309
| || | || || || || | || |||| |||||||| ||| | | || |||
Sbjct 79529 AAGGGAAGTCGGAGGGCCATGAAAGTGTCAGCCAGACCCTGGACACCCAGAGCAATGGGT 79588
Query 147310 CGATGCTTTTCGT-TGCTGCGCTTCGCG--CTCGCT-ATGGGATAGTGGTTGCGATCAAT 147365
|| || ||| || || |||| | |||| | ||| |||| ||| || || ||
Sbjct 79589 CGGTG----TCGCATGTTGGACTTCTTGGCCTCGGGGACGGGGTAGTAGTTTCGGTCGAT 79644
Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425
|| ||||||||| ||||| | || || | || | || |||| ||| || ||
Sbjct 79645 GATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTA 79704
Query 147426 A---------GTCCCGTCTTCGAC--ACGTACGCATTGGTTCACGGCGATAGACGCCAGA 147474
||| ||||| ||| || | | | || || || || || |||||
Sbjct 79705 GAACGAGTTGGTCTCGTCT-CGAGTGACAAAAGTA--GG--CAGCGCAATGGAGGCCAGG 79759
Query 147475 TTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCT 147533
|||||||||||| ||| || || | || ||||| || || ||| ||||||||||
Sbjct 79760 TTGCAGACGGCCACCTCGTCAGGAGACGA-GTACTCGACAATCTCGCAGCACAGGTTGGA 79818
Query 147534 GCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAG 147593
| || || |||| || | ||| ||| || || ||||| | ||| ||| ||||
Sbjct 79819 CGACTTGATAGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAG 79878
Query 147594 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA---ACCTATGCAGGTCCTG 147650
|||| | || ||||| |||| || || | || ||| ||| | |||
Sbjct 79879 CATGAAGGGGTTGCCGGACTCGGTCTGACAGTCCAGAATGTGGTACCA---CAGCTTCTG 79935
Query 147651 CGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAA 147710
|| | | | || |||||||| || |||||| ||||||||| | ||| ||
Sbjct 79936 GGCGGGGATGGTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAA 79995
Query 147711 CTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACAT 147770
||||||||||||| || ||||||||||||||| | || ||||| || | ||||
Sbjct 79996 CTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCACTC 80055
Query 147771 GTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC 147830
| ||| | | || || ||| ||||| || || | ||| || || | |||||
Sbjct 80056 GGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATC 80115
Query 147831 GCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTA-AGCACGCTATAGATGT 147889
|| ||| ||||| || ||| | || | || || | | ||| ||
Sbjct 80116 TCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGACGT 80174
Query 147890 CGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGT 147946
|| |||||||||| || | ||| | ||| | || || ||||| ||||||||||
Sbjct 80175 CGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGT 80234
Query 147947 CGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGC 148006
|||| | || | ||||||| |||| |||| |||||| | | ||| | | || |
Sbjct 80235 CGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTC 80294
Query 148007 CGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGC 148066
||||||| | ||| | | |||| ||||| | | ||| | | | |||||||
Sbjct 80295 CGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGC 80354
Query 148067 CGCCGCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCGTGTAGATGCCGTCGAT 148124
| || || |||| || ||| ||| ||| || | |||||| |||||||||||||
Sbjct 80355 CTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGT--AGATGCCGTCGAT 80412
Query 148125 GCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGC 148184
| ||||| || | | | | |||||||| |||| || || | || || ||
Sbjct 80413 GGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGC 80472
Query 148185 CGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTC 148244
| | ||||||||| || || || || | || ||| ||| | || |||||
Sbjct 80473 GTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGTCTC 80532
Query 148245 AATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTG 148304
||||| | |||||||||||||| || || | | || ||||||| ||| |||||
Sbjct 80533 GATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTG 80592
Query 148305 TGGTCGTTCGGCAACTTGATTGTTGATCTTG-AGAAGATATCCATTTTCGAGGGTTTTGT 148363
|||| || ||||| | ||||| || | || || ||| | || || || |||
Sbjct 80593 AGGTCTCTCAGCAACGGCACCGTTGA-CTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651
Query 148364 AACCAAAGTACTTGTA 148379
| |||||||| |||||
Sbjct 80652 AGCCAAAGTAGTTGTA 80667
>seq3
Length=2682169
Score = 129 bits (142), Expect = 6e-25
Identities = 330/495 (67%), Gaps = 17/495 (3%)
Strand=Plus/Minus
Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829
|| |||||| | ||||| | ||||||||| || |||| || || |||| |||
Sbjct 1915348 AAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCCACCTT--TGGC-GAG 1915292
Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889
|| | | || || || || || ||| | ||||| || ||| |||||| ||||
Sbjct 1915291 CGACTCATTGCCTTTGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATC 1915232
Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949
|| | | || | ||| | ||||| |||||||| ||| |||||| | |||||
Sbjct 1915231 TTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCC 1915172
Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGA 47008
|| ||||| || || |||||||||||||| ||||| || || ||| | | ||
Sbjct 1915171 CGAGACGAGGGTCTGCACACGGACTTTGCCTGTCTGCTGTTCT----CGCACCTC---GA 1915119
Query 47009 GAAATTAAACTCGGACACGATCCT-GAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAA 47065
||| ||| | | ||| | ||| | || || ||||| || ||||||| |
Sbjct 1915118 GAACCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGCATCGAGCA 1915059
Query 47066 GGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTG 47125
|||||| | || | ||||| ||| || |||||||||||||||| || |||||
Sbjct 1915058 GGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCATGAACGCCAAGCTCATGTG 1914999
Query 47126 CGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTT 47185
| | || |||||||||||||| || || ||| ||||| |||||| | | || |
Sbjct 1914998 CCAGTACATTGAGTTTGTGGCCGACCGGCTGCTGGTGGCCCTCGGAAACTCCAAGGTCTA 1914939
Query 47186 TAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTT 47245
|| | || || || || || ||| | ||||| ||||| | ||||| ||||| ||
Sbjct 1914938 CAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTT 1914879
Query 47246 TTTCGAGAAACGAGT 47260
|||||||| || ||
Sbjct 1914878 CTTCGAGAAGCGGGT 1914864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610967652040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |