Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2 187 2e-42 seq3 129 6e-25 >seq2 Length=2949780 Score = 187 bits (206), Expect = 2e-42 Identities = 966/1516 (64%), Gaps = 49/1516 (3%) Strand=Plus/Plus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGA-TACACATTGCTAGTGAAAGG 146951 ||||| | || |||||||| || ||||| |||| |||| || | ||| ||| | || Sbjct 79172 TTGACAATCTGGAACTCGCCAGCAAGCACTCGTC-GAGAGTAAATGTTGGAGGTGTAGGG 79230 Query 146952 CTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCAC 147011 ||| ||| |||| || ||| | || || | |||| ||||| |||||| ||||| Sbjct 79231 CTCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGGTGGGCATGGGGGCCAC 79290 Query 147012 CAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCA 147071 || || || ||||||| ||| | ||| ||| |||| | | | ||| ||||| Sbjct 79291 CAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGAGATCGTCCCACTCCCA 79350 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAG--CACTCCTCGACTGGCGGGA 147129 | | ||||| ||||||||||||| || |||| || ||| | | || ||| ||| Sbjct 79351 GAGCTCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGGTCACCCTTGGA--GGCAGGA 79408 Query 147130 CTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGC 147189 ||| ||| || |||| ||||| | |||| || || ||||| | Sbjct 79409 GAGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGGCCATCTCGTAGGAGGCCTCAACG 79468 Query 147190 GCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCG 147249 ||||| | ||| ||||| ||| ||| || |||| || | || || ||| ||| Sbjct 79469 GCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCCTCGGACTCA 79528 Query 147250 TAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 | || | || || || || | || |||| |||||||| ||| | | || ||| Sbjct 79529 AAGGGAAGTCGGAGGGCCATGAAAGTGTCAGCCAGACCCTGGACACCCAGAGCAATGGGT 79588 Query 147310 CGATGCTTTTCGT-TGCTGCGCTTCGCG--CTCGCT-ATGGGATAGTGGTTGCGATCAAT 147365 || || ||| || || |||| | |||| | ||| |||| ||| || || || Sbjct 79589 CGGTG----TCGCATGTTGGACTTCTTGGCCTCGGGGACGGGGTAGTAGTTTCGGTCGAT 79644 Query 147366 AATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA 147425 || ||||||||| ||||| | || || | || | || |||| ||| || || Sbjct 79645 GATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCAGCTTCTTGAAGTCGTA 79704 Query 147426 A---------GTCCCGTCTTCGAC--ACGTACGCATTGGTTCACGGCGATAGACGCCAGA 147474 ||| ||||| ||| || | | | || || || || || ||||| Sbjct 79705 GAACGAGTTGGTCTCGTCT-CGAGTGACAAAAGTA--GG--CAGCGCAATGGAGGCCAGG 79759 Query 147475 TTGCAGACGGCCGTCTCTTC-GGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCT 147533 |||||||||||| ||| || || | || ||||| || || ||| |||||||||| Sbjct 79760 TTGCAGACGGCCACCTCGTCAGGAGACGA-GTACTCGACAATCTCGCAGCACAGGTTGGA 79818 Query 147534 GCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAG 147593 | || || |||| || | ||| ||| || || ||||| | ||| ||| |||| Sbjct 79819 CGACTTGATAGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGTCCTTGTAGAG 79878 Query 147594 CATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAA---ACCTATGCAGGTCCTG 147650 |||| | || ||||| |||| || || | || ||| ||| | ||| Sbjct 79879 CATGAAGGGGTTGCCGGACTCGGTCTGACAGTCCAGAATGTGGTACCA---CAGCTTCTG 79935 Query 147651 CGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAA 147710 || | | | || |||||||| || |||||| ||||||||| | ||| || Sbjct 79936 GGCGGGGATGGTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCTGCTTGAA 79995 Query 147711 CTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACAT 147770 ||||||||||||| || ||||||||||||||| | || ||||| || | |||| Sbjct 79996 CTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCACTC 80055 Query 147771 GTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATC 147830 | ||| | | || || ||| ||||| || || | ||| || || | ||||| Sbjct 80056 GGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATC 80115 Query 147831 GCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTA-AGCACGCTATAGATGT 147889 || ||| ||||| || ||| | || | || || | | ||| || Sbjct 80116 TCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGA-AGACGT 80174 Query 147890 CGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGT 147946 || |||||||||| || | ||| | ||| | || || ||||| |||||||||| Sbjct 80175 CGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGT 80234 Query 147947 CGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGC 148006 |||| | || | ||||||| |||| |||| |||||| | | ||| | | || | Sbjct 80235 CGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTC 80294 Query 148007 CGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGC 148066 ||||||| | ||| | | |||| ||||| | | ||| | | | ||||||| Sbjct 80295 CGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGC 80354 Query 148067 CGCCGCCGTACTTTGATATGGCAGCGCAA-TCGCCCAA-TGTCGTGTAGATGCCGTCGAT 148124 | || || |||| || ||| ||| ||| || | |||||| ||||||||||||| Sbjct 80355 CTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGT--AGATGCCGTCGAT 80412 Query 148125 GCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGC 148184 | ||||| || | | | | |||||||| |||| || || | || || || Sbjct 80413 GGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGC 80472 Query 148185 CGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTC 148244 | | ||||||||| || || || || | || ||| ||| | || ||||| Sbjct 80473 GTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAGTTGTAGGTCTC 80532 Query 148245 AATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTG 148304 ||||| | |||||||||||||| || || | | || ||||||| ||| ||||| Sbjct 80533 GATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTG 80592 Query 148305 TGGTCGTTCGGCAACTTGATTGTTGATCTTG-AGAAGATATCCATTTTCGAGGGTTTTGT 148363 |||| || ||||| | ||||| || | || || ||| | || || || ||| Sbjct 80593 AGGTCTCTCAGCAACGGCACCGTTGA-CTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGA 80651 Query 148364 AACCAAAGTACTTGTA 148379 | |||||||| ||||| Sbjct 80652 AGCCAAAGTAGTTGTA 80667 >seq3 Length=2682169 Score = 129 bits (142), Expect = 6e-25 Identities = 330/495 (67%), Gaps = 17/495 (3%) Strand=Plus/Minus Query 46773 AAAAAGGCCCAGTGGGCCATGAAGTGGATC---GAGAGCGAGACCGCCACGCTGGCCGAG 46829 || |||||| | ||||| | ||||||||| || |||| || || |||| ||| Sbjct 1915348 AAGAAGGCCGACTGGGCGCTCAAGTGGATCTCCGACGACGAGTCCACCTT--TGGC-GAG 1915292 Query 46830 CGCATGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATT 46889 || | | || || || || || ||| | ||||| || ||| |||||| |||| Sbjct 1915291 CGACTCATTGCCTTTGCCGCCGTGGAGGGCATCTTTTTCTCCGGCTCGTTTGCCTCCATC 1915232 Query 46890 TTTTACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCG 46949 || | | || | ||| | ||||| |||||||| ||| |||||| | ||||| Sbjct 1915231 TTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTCTCCAACGAGCTCATCTCC 1915172 Query 46950 CGCGACGAAGGACTACACACGGACTTTGCGTGTCT-CTATTACAAGACGCGCGTGAATGA 47008 || ||||| || || |||||||||||||| ||||| || || ||| | | || Sbjct 1915171 CGAGACGAGGGTCTGCACACGGACTTTGCCTGTCTGCTGTTCT----CGCACCTC---GA 1915119 Query 47009 GAAATTAAACTCGGACACGATCCT-GAGCATGT--TTAGGGAGGCGGTGAGCATCGAAAA 47065 ||| ||| | | ||| | ||| | || || ||||| || ||||||| | Sbjct 1915118 GAACCGGCCCTCCAAGAAGATTGTCGAGGACGTGATTGTCGAGGCCGTTGGCATCGAGCA 1915059 Query 47066 GGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTG 47125 |||||| | || | ||||| ||| || |||||||||||||||| || ||||| Sbjct 1915058 GGAGTTCCTGACCGACGCGCTCCCCTGCGGTCTGCTGGGCATGAACGCCAAGCTCATGTG 1914999 Query 47126 CGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCGAAATATTT 47185 | | || |||||||||||||| || || ||| ||||| |||||| | | || | Sbjct 1914998 CCAGTACATTGAGTTTGTGGCCGACCGGCTGCTGGTGGCCCTCGGAAACTCCAAGGTCTA 1914939 Query 47186 TAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTT 47245 || | || || || || || ||| | ||||| ||||| | ||||| ||||| || Sbjct 1914938 CAACTCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGCAAGACCAACTT 1914879 Query 47246 TTTCGAGAAACGAGT 47260 |||||||| || || Sbjct 1914878 CTTCGAGAAGCGGGT 1914864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610967652040