Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 212 7e-50 >seq6 Length=1650383 Score = 212 bits (234), Expect = 7e-50 Identities = 477/715 (67%), Gaps = 19/715 (3%) Strand=Plus/Minus Query 146803 TGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCCACC 146862 || || | ||| |||||||| |||| || || | |||| ||||| || |||| | Sbjct 1315245 TGGGGCTTGTATCCCTCGAGCACAAAGTCGTCGTACTTGAAGTCGTCGATATCCTTAAT- 1315187 Query 146863 CGCCTCAA--AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCA 146920 | ||| || | | ||||||||||| || ||| | | | | ||| |||| Sbjct 1315186 -GTCTCGGGCAAACGTCAGCTTGGGGAACTCTCCGGGAGTTCGAGAAATCTGCTGCTTCA 1315128 Query 146921 GGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCG 146980 ||| |||||||||| ||| ||||| ||||| |||| ||||| | | || || Sbjct 1315127 GGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGCCAC 1315068 Query 146981 GCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGA 147040 | || ||||||| ||||| | ||| || | ||| | ||| ||| ||||||| Sbjct 1315067 AGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGTTGA 1315008 Query 147041 AGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCT--CCCC 147098 ||||||| ||||| |||| || | |||| |||||||||||||||||| ||| |||| Sbjct 1315007 AGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGCCCC 1314948 Query 147099 GT--CG-----------GCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 | || | ||| || |||||||| | ||||| || || ||||| |||| Sbjct 1314947 GCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAGAGCCA 1314888 Query 147146 TGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCC 147205 | || ||| || || |||||||| || || | | | || | | || |||||| Sbjct 1314887 TCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGGGTTGG 1314828 Query 147206 TCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCC 147265 |||| | | || ||| | | ||||| |||||||||||||| | ||||| ||| Sbjct 1314827 TCTTGAGAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGTCTGTGT 1314768 Query 147266 CGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGT 147325 ||||||| |||| ||| ||||| || | ||| |||||||| ||||| || ||||||| Sbjct 1314767 CGCAGTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGTCCCAGGT 1314708 Query 147326 CGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGT 147385 | || |||||| | || ||| || |||||||| ||| |||| ||| Sbjct 1314707 CTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCGTTTCCGT 1314648 Query 147386 CCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACC 147445 |||||||| | ||| || |||| ||| ||| || | || | |||| Sbjct 1314647 CCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCCACAAACC 1314588 Query 147446 AGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 | |||||||| |||||||| || | | ||||||| ||| ||||| ||||| || Sbjct 1314587 ACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGAGG 1314533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487715549600