Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq5 208 8e-49 seq2 134 1e-26 seq7 125 7e-24 >seq5 Length=1963011 Score = 208 bits (230), Expect = 8e-49 Identities = 922/1444 (64%), Gaps = 47/1444 (3%) Strand=Plus/Plus Query 7555 GAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGAC 7614 ||||| |||||||||||| |||||||||| |||| || ||||| || ||||| | | Sbjct 1036929 GAACGTCCTCAACACATGCTCATGCGCGTGGCTCTGGGGATCCACGGAGACGACATCGCC 1036988 Query 7615 GCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACC 7674 | | || |||||| |||| || |||| ||||| || || |||||| Sbjct 1036989 AAGGTGCTCGACACGTACACCGCTCTGTCGCTGCGCAAGTTCACGCATGCCTCTCCCACC 1037048 Query 7675 ATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGC 7734 | || ||| ||||| | | || |||| ||||||||| || | ||||| Sbjct 1037049 CTCTTCAACGCAGGCACCCCCCAGGGCCAGCTGTCGTCGTGTTTTCTGGTGGCCATGGCT 1037108 Query 7735 GAAGACAGCATCGACGGCATTTACAACACGCTGCGCGAT-TGCGCCAATATTTCCAAATA 7793 | ||| ||||||||| || ||| | || || | || || || | || || ||| Sbjct 1037109 GCGGACTCCATCGACGGAATCTACGATACCCT-CAAGACGTGTGCGCAAATCTCGAAAAC 1037167 Query 7794 CGGCGGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGG---TAGCCGCATCGT 7850 || |||||| || |||||| | | || || | || ||||| || || | | Sbjct 1037168 CGCCGGCGGCATCGGTCTGCATATCCACAACATCCGAGCCAAGGGCGCTATTATTACAGG 1037227 Query 7851 GTCCACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGT 7910 ||| ||| |||| | |||| || | | ||||||| | | |||||||| ||| | | Sbjct 1037228 GTCT--CAA-GGAAGATCCAGTGGCATCGTGCCCATGCTCAGAGTGTTCAACAACACCGC 1037284 Query 7911 GCGACATGTAGACCAGGG-GGGAA--AGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCC 7967 | | | || |||||||| ||||| |||| ||||| |||||||||| ||||||| Sbjct 1037285 GAGGTACGTGGACCAGGGTGGGAACAAGCGTCCCGGCGCGTTTGCCATCTATCTGGAGCC 1037344 Query 7968 GTGGCACGCGGACATTTACGCAGTGCTAAATCTGCGTCGCAACATGGGTTGCGAAGACAG 8027 ||||||||| |||||| || | || |||||||| ||| || |||||| | Sbjct 1037345 GTGGCACGCCGACATTCTCGATTTTCTCAATCTGCGGAAAAACCATGGAGCCGAAGAGAA 1037404 Query 8028 CAAAGCGCGCGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCA 8087 || ||| || || || |||| || ||||||||||||||| ||||| |||| ||| || | Sbjct 1037405 CAGAGCCCGGGACCTGTTCTACGCATTGTGGGTGCCCGACCTGTTCATGAAGCGGGTCGA 1037464 Query 8088 TTTCGACGCACAATGGTCGCTCATGTGCCCC--GATCGTTGCCCTTTATTAAAAAACGTT 8145 | || | | |||||| | | || ||| || | | || | | || |||| Sbjct 1037465 GCGGGGCGAAAAGTGGTCGTTGTTCTGTCCCAAGAAGGCT--CCGGGACTGGAAGACGTG 1037522 Query 8146 TACGGTTCAAAATTTGAACAATTGTACAAACAATACGAACACGACGGCGCGTACGTGCGG 8205 | || | | ||||||||| |||| | | ||||| | ||| |||| || Sbjct 1037523 TGGGGCCCCGAGTTTGAACAAAAGTACGAGGAGTACGAGAAAAGGGGCCTGTAC-AACGC 1037581 Query 8206 CAAG-TGAAAGCGCGCGACCTGCACCGCGCCATTAT--CGAATGTCAAAACGAAACCGGT 8262 | || | || || | || ||| | || ||| | ||| | || | ||||||||| Sbjct 1037582 CCAGATCAACGCCCAGGAGCTGTTCAAGGCGATTCTGACGA--GCCAGATCGAAACCGGA 1037639 Query 8263 ATGCCGTACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGC 8322 || | |||||||||||| ||| |||||||| || ||| || ||| |||| Sbjct 1037640 GGCCCCTTCATGCTGTACAAGGACAGCTGCAACGCAAAGTCCAACCAGCAGAACCTGGGA 1037699 Query 8323 ACCATTTGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTG 8382 ||||| | ||| |||||| | ||||| || |||||| |||| || || ||| Sbjct 1037700 ACCATCAAATCGTCCAACCTGTGCACGGAAATCGTCCAGTACTCGTCGCCGGAAGAGGTG 1037759 Query 8383 GCCGTTTGCAATCTAGCGTCGGTGTGTTTAAACGCGTTCGT-----------TGATCGAC 8431 || || ||||| || ||||| ||| | | | ||| || || |||| Sbjct 1037760 GCGGTGTGCAACCTGGCGTCCGTGGCTCTGCCGGAGTTTGTCCAGCTCAAGGAGAGCGAC 1037819 Query 8432 -------GCTCAAACACTTACGACTTTGAACAATTGAAAAACGCCGT---GCAAGTGACG 8481 | || | ||| |||||| | || || | || |||| || ||||| Sbjct 1037820 AAAACCACCGCAGGGTCCTACAACTTTGGAGAACTGCATAAGACCGTCAAACACATGACG 1037879 Query 8482 GTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCGCGTA 8541 || || | | ||||||| || | ||| | || ||| | | || || Sbjct 1037880 ---CGAAACCTCAACAGCATCATCGAGGCCAACTGCTACCCCGTCAAGGAGGCAGAAACG 1037936 Query 8542 TCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCC 8601 || |||| |||||| | || ||| |||||||||||| |||||||| |||| |||| Sbjct 1037937 TCCAACAAGCGCCATCGTCCGATTGCCGTGGGCGTGCAGGGTCTGGCAGACGTGTTTATG 1037996 Query 8602 ATGTTGCGCCTCCCCTACGAAAGCCAAGAAGC-GCGCATGCTCAACATAAAAATAGCGGA 8660 | | ||||| | ||||| || |||| ||||| ||| | || ||| | || || Sbjct 1037997 AAGCTGCGCATGCCCTATGATAGCCCTGAAGCTGCGGA-ACTGAACGTTCTCATCTTCGA 1038055 Query 8661 AACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTA 8720 || | || ||| || | ||||| | | | || || |||| |||| | || Sbjct 1038056 GACCATTTACCACGCTGCCTGCGAAGCGTCCATTGAGCTGGCAGCAGAACTGGGACCCTA 1038115 Query 8721 CGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGT 8780 || || |||| |||||| ||||||||| || | |||| | || ||||||| Sbjct 1038116 TGAGTCATACGAGGGCAGTCCTGCCAGCAAGGGTCTTCTGCAGTTTGATCTGTGGAACAA 1038175 Query 8781 CACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTGCTCAATTCGGTTT 8840 || ||| | | | ||| | ||| | | || ||| | || | || | Sbjct 1038176 GACTCCCTCGGATCTCTGGGACTGGGCCCTGCTCAAGACCAATCTCGCCAAGCATGGCAT 1038235 Query 8841 GCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAA 8900 |||||| |||||| |||||||| |||||| ||||| | || | || || | || | Sbjct 1038236 GCGCAACTCGCTGCTGGTGGCTCCCATGCCTACCGCTTCTACCTCCCAGATCCTCGGCCA 1038295 Query 8901 CAACGAATCCTTTGAGCCGTTCACCAACAACGTGTACGTGAGACGAGTGTTGGCCGGCGA 8960 |||||| | ||| ||||| | ||| |||| | ||| || | |||||| ||||||||| Sbjct 1038296 CAACGAGTGCTTCGAGCCCTACACGTCCAACATTTACCTGCGGCGAGTGCAGGCCGGCGA 1038355 Query 8961 TTTT 8964 ||| Sbjct 1038356 GTTT 1038359 >seq2 Length=2949780 Score = 134 bits (148), Expect = 1e-26 Identities = 370/561 (66%), Gaps = 7/561 (1%) Strand=Plus/Minus Query 7563 TCAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTT 7622 ||| || ||| | |||| ||| | || || || |||||||| ||||||| | || | Sbjct 80593 TCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGACATTGCCCGAGCTAT 80534 Query 7623 GGAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGC 7682 || || ||| | |||||| ||| | || || || ||||| |||||| ||| Sbjct 80533 CGAGACCTACAACTACATGTCTCAGAAGTACTTCACCCATGCTTCTCCCACCCTGTACAA 80474 Query 7683 CGCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAG 7742 ||| ||||| | ||| || |||| |||||||| | | | |||| || ||| Sbjct 80473 CGCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCAACATGAAGGACGACTC 80414 Query 7743 CATCGACGGCATTTACAACACGCTGCGCGA-TTGCGCCAATATTTCCAAATACGGCGGCG 7801 |||||||||||| ||| |||| || | || ||| || |||||||| | || || | Sbjct 80413 CATCGACGGCATCTACGACACTCT-CAAGACTTGTGCTCTCATTTCCAAGTCCGCTGGAG 80355 Query 7802 GAATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACG 7861 | || |||||| | | || || | || || | ||| | ||||| ||||||| Sbjct 80354 GCATTGGTCTGTCCATCCACAACATCCGAGCTACCGGCTCCTACATCGCTGGAACCAACG 80295 Query 7862 GAAAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAG 7921 ||| ||| |||| | | ||||||| |||| |||| ||| ||| | | ||| | || | Sbjct 80294 GAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAACACCGCTCGATACGTCG 80235 Query 7922 ACCAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGG 7978 ||||||| || ||||| || ||| |||||| || ||||||| ||||||| | Sbjct 80234 ACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTGGAGCCCTGGCACGACG 80175 Query 7979 ACATTTACGCAGTGCT-AAATCTGCGTCGCAACATGGGTTGCGAAGACAGCAAAGCGCGC 8037 || | | || ||| || | ||||| ||| ||| || || | ||| || Sbjct 80174 ACGTCTTCG-AGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAGGAGATTCGAGCCCGA 80116 Query 8038 GATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCA 8097 ||||| ||| | | | ||| | ||||| ||||| ||| ||| || | |||| Sbjct 80115 GATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGAGTCGAGCAGAACGCC 80056 Query 8098 CAATGGTCGCTCATGTGCCCC 8118 | ||| | |||||||||||| Sbjct 80055 GAGTGGACCCTCATGTGCCCC 80035 Score = 123 bits (136), Expect = 3e-23 Identities = 163/226 (72%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||||| ||| |||| || ||||| || ||||| ||||| || ||||||||||| | Sbjct 2456743 CCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2456684 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | |||||||| || || || Sbjct 2456683 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGA 2456624 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 2456623 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 2456564 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCA 134712 ||||| || ||||| || || || | || || || || ||||||| Sbjct 2456563 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518 >seq7 Length=1109975 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| |||||||| ||||| || || ||||| ||||| || ||||||||||| | Sbjct 1062782 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1062723 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| || || || || || | |||||||| || || || Sbjct 1062722 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1062663 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 1062662 ATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 1062603 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTT 134715 || || || || || |||||||| | || || || ||||| ||||||| Sbjct 1062602 TCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCATTT 1062554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505398153618280