Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 5e-21
>seq3
Length=2682169
Score = 116 bits (128), Expect = 5e-21
Identities = 342/523 (65%), Gaps = 22/523 (4%)
Strand=Plus/Plus
Query 122380 ACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 122439
||||||||||| |||||||||||||| || | || ||||| ||||| ||||| ||
Sbjct 1914864 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 1914923
Query 122440 GGATTCTTCGCGTTCCAAA--TGGGTGGCACC-----CCAACTTGTTTGAGGAGACGATC 122492
|| || | | ||| | | | || | || ||| | || || || ||
Sbjct 1914924 GGGTTGGTGGAGTTGTAGACCTTGGAGTTTCCGAGGGCCACC-------AGCAGCCGGTC 1914976
Query 122493 CGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACATGG 122552
| |||| |||||||||||| | |||| || | |||||| || | || || ||
Sbjct 1914977 GGCCACAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGACCGCAGGG 1915036
Query 122553 GAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGAT 122612
||| ||||| | |||| | | ||| || |||| ||||| | | | | | ||
Sbjct 1915037 GAGCGCGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGTCCTCGAC 1915096
Query 122613 AGTTTCGGTAGTGGGTCTATTACGCAAAGT-CTTGAAGAGCTCCACGGCAAACTCCTGGT 122671
| | | | | ||| | || | | | || | ||| ||| |||||| ||| ||
Sbjct 1915097 AATCTTCTTGGAGGGCCGGTT-CTCGAGGTGCGAGAACAGCAGACAGGCAAAGTCCGTGT 1915155
Query 122672 GGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCC 122731
| |||||||| |||||||| || || || || |||||| || || ||||||||||| |
Sbjct 1915156 GCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTC 1915215
Query 122732 GCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACG 122791
||||||| | ||| | || | | || || |||||||| ||||| |||||||| |
Sbjct 1915216 GCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTCCACGGCGG 1915275
Query 122792 CAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATC---AAACCATTTCATTG 122848
|||| |||| || || ||| | |||| | |||| | || | ||| || | |
Sbjct 1915276 CAAAGGCAATGAGTCGCTCGCCAAAGGTG---GACTCGTCGTCGGAGATCCACTTGAGCG 1915332
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891
|||| | |||||||||| || || || | || | ||||||
Sbjct 1915333 CCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGC 1915375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031693834400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |