Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3 156 5e-33
seq5 134 2e-26
>seq3
Length=2682169
Score = 156 bits (172), Expect = 5e-33
Identities = 350/518 (68%), Gaps = 12/518 (2%)
Strand=Plus/Plus
Query 129737 ACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATAAAATCAAAT 129796
|||||||||||||||||||| ||||| ||| ||| ||| |||||||| || || ||
Sbjct 1914864 ACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAGCGAGATGTTCTCCATGAAGTCGAAG 1914923
Query 129797 GGGTTCTTTGAGTTCCAAATTGCTGGCACT--CCAATCTGTTTGAGGAGACGATCCGAGA 129854
||||| | ||||| | | || | | | || | || || || || | |
Sbjct 1914924 GGGTTGGTGGAGTTGTAGAC--CTTGGAGTTTCCGAGGGCCACCAGCAGCCGGTCGGCCA 1914981
Query 129855 CGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACATGGGAGCG 129914
| |||||||||||| |||| || || |||||| || | || || |||||||
Sbjct 1914982 CAAACTCAATGTACTGGCACATGAGCTTGGCGTTCATGCCCAGCAGACCGCAGGGGAGCG 1915041
Query 129915 CGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTGAATGGTCT 129974
|||| | |||| ||| ||| ||| | || || || | | | | | | |||
Sbjct 1915042 CGTCGGTCAGGAACTCCTGCTCGATGCCAACGGCCTCGACAATCACGTCCTCGACAATCT 1915101
Query 129975 CCGTGCCAGGTCTATTGCGCAAAGT-CTTGAAGAGTTCCACGGCAAACTCCTGGTGGAGA 130033
| || || | || | | | || | ||| || |||||| ||| ||| |||
Sbjct 1915102 TCTTGGAGGGCCGGTT-CTCGAGGTGCGAGAACAGCAGACAGGCAAAGTCCGTGTGCAGA 1915160
Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093
|||||||| ||||||||||| || || |||||| ||| || ||||||||||| ||||||
Sbjct 1915161 CCCTCGTCTCGGGAGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGACCTCGCTTC 1915220
Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153
|| | |||||| || | ||| ||||| ||||| ||||| |||||||| || ||
Sbjct 1915221 TTGAGCCAGAAGATGGAGGCAAACGAGCCGGAGAAAAAGATGCCCTCCACGGCGGCAAAG 1915280
Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACT--TTGTATCA-AACCACTTCATCGCCCAC 130210
|||| ||| ||||| |||||| ||||| | || | | |||||| | ||||||
Sbjct 1915281 GCAATGAGTCGCTCGCCAAAGG---TGGACTCGTCGTCGGAGATCCACTTGAGCGCCCAG 1915337
Query 130211 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248
| ||||| |||| ||| || || | ||||| ||| ||
Sbjct 1915338 TCGGCCTTCTTCTTGATGCAGGGAATGGTCTCGATGGC 1915375
>seq5
Length=1963011
Score = 134 bits (148), Expect = 2e-26
Identities = 557/870 (64%), Gaps = 9/870 (1%)
Strand=Plus/Minus
Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753
|||| ||| || || || | |||||||| || ||||| | ||| ||| |
Sbjct 1037801 GACAAACTCCGGCAGAGCCACGGACGCCAGGTTGCACACCGCCACCTCTTCCGGCGACGA 1037742
Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813
||||| | ||||||||||||| ||| || || ||||| |||| ||||| || ||
Sbjct 1037741 GTACTGGACGATTTCCGTGCACAGGTTGGACGATTTGATGGTTCCCAGGTTCTGCTGGTT 1037682
Query 118814 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 118873
||||||| ||| || |||||||| |||||| | || || || || | |||
Sbjct 1037681 GGACTTTGCGTTGCAGCTGTCCTTGTACAGCATGAAGGGGCCTCCGGTTTCGATCTGGCT 1037622
Query 118874 CTTGAGAATAGCCTTCCAGACATCGGCAGC-TGGCACAGTGGCGTTGG-CTCGCCCCTCT 118931
| | ||||| ||||| | | || || | | | | ||||||| | |||||| |
Sbjct 1037621 CGTCAGAATCGCCTTGAACAGCTCCTGGGCGTTGATCTG-GGCGTTGTACAGGCCCCTTT 1037563
Query 118932 TCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGT 118991
|| ||||||| ||| ||||||||| ||| | ||| || || ||
Sbjct 1037562 TC-TCGTACTCCTCGTACTTTTGTTCAAACTCGGGGCCCCACACGTCTTCCAGTCCCGGA 1037504
Query 118992 GCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGG 119051
||||| | || ||||| | ||||| | | ||| ||| |||||||||||||| |||
Sbjct 1037503 GCCTTCTTGGGACAGAACAACGACCACTTTTCGCCCCGCTCGACCCGCTTCATGAACAGG 1037444
Query 119052 TCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTG 119111
|| || | ||| | || |||| || ||||| | ||||| | || || ||
Sbjct 1037443 TCGGGCACCCACAATGCGTAGAACAGGTCCCGGGCTCTGTTCTCTTCGGCTCCATGGTTT 1037384
Query 119112 AGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 119171
|||| | | ||| || | || || ||||||||||| ||||| || | || |
Sbjct 1037383 TTCCGCAGATTGAGAAAATCGAGAATGTCGGCGTGCCACGGCTCCAGATAGATGGCAAAC 1037324
Query 119172 GACCCCTTACGACGA---CCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGA 119228
| || ||| ||| |||||| || |||||||| ||| ||| || || |
Sbjct 1037323 GCGCCGGGACGCTTGTTCCCACCCTGGTCCACGTACCTCGCGGTGTTGTTGAACACTCTG 1037264
Query 119229 AGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCT 119288
||||| || | ||| ||| |||| || | | ||| |||| || ||||||
Sbjct 1037263 AGCATGGGCACGATGCCACTGGATCTTCCTTGAGACCCTGTAATAATAGCGCCCTTGGCT 1037204
Query 119289 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCC 119348
| || | |||||| |||| ||| || || || || || ||||||||||| ||| |
Sbjct 1037203 CGGATGTTGTGGATATGCAGACCGATGCCGCCGGCGGTTTTCGAGATTTGCGCACACGTC 1037144
Query 119349 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTC 119408
|||| | ||||||| || ||||| ||||| | | || | || || || |
Sbjct 1037143 TTGAGGGTATCGTAGATTCCGTCGATGGAGTCCGCAGCCATGGCCACCAGAAAACACGAC 1037084
Query 119409 GACATTTGAGGCCT-GGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACAT 119467
|||| || | ||| ||| || || ||||||||||| || || | || || ||||| |
Sbjct 1037083 GACAGCTG-GCCCTGGGGGGTGCCTGCGTTGAAGAGGGTGGGAGAGGCATGCGTGAACTT 1037025
Query 119468 ACCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACC 119527
| | |||| | ||| || || | || || ||||| || ||||| || ||
Sbjct 1037024 GCGCAGCGACAGAGCGGTGTACGTGTCGAGCACCTTGGCGATGTCGTCTCCGTGGATCCC 1036965
Query 119528 GATCGAGACCCGCATAAACATGTATTGGGG 119557
| | || ||||| | ||||| ||| ||
Sbjct 1036964 CAGAGCCACGCGCATGAGCATGTGTTGAGG 1036935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618434898512840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |