Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016- 03-01] 39 sequences; 21,750,525 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3 131 2e-25 >seq3 Length=2682169 Score = 131 bits (144), Expect = 2e-25 Identities = 171/235 (73%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 94723 GCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT 94782 |||||| | || |||| || || | ||||| || || ||||| | |||||| | | Sbjct 1915375 GCCATCGAGACCATTCCCTGCATCAAGAAGAAGGCCGACTGGGCGCTCAAGTGGATC--T 1915318 Query 94783 ACAAAGTCGCGTTC--CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCT 94840 | | | || || | ||||| ||||||||| | || ||||| || ||||| |||| Sbjct 1915317 CCGACGACGAGTCCACCTTTGGCGAGCGACTCATTGCCTTTGCCGCCGTGGAGGGCATCT 1915258 Query 94841 TCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTC 94900 | ||||| || || || | | || | |||||||||||||||||||||||||| || | Sbjct 1915257 TTTTCTCCGGCTCGTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCC 1915198 Query 94901 TCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | ||||||||||||||| ||||| || |||||||| || ||| || ||||| Sbjct 1915197 TGACCTTCTCCAACGAGCTCATCTCCCGAGACGAGGGTCTGCACACGGACTTTGC 1915143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260515660360