Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2 288 1e-72
seq5 199 4e-46
>seq2
Length=2949780
Score = 288 bits (318), Expect = 1e-72
Identities = 445/629 (71%), Gaps = 10/629 (2%)
Strand=Plus/Minus
Query 53170 TGGTGAGACGCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGAC-- 53227
|| ||||| |||||| | | ||||||| || | | ||||||||||| ||||||
Sbjct 80605 TGCTGAGAGACCTCAGCAGATGATCATGCGAGTGTCTGTCGGTATCCACGGCGACGACAT 80546
Query 53228 TACACGCG-TGTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTTACGCACGCCAC 53286
| | || | | || ||||| ||| ||| ||| || |||||||| || || || |
Sbjct 80545 TGCCCGAGCTATC---GAGACCTACAACTACATGTCTCAGAAGTACTTCACCCATGCTTC 80489
Query 53287 GCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGC 53346
|| ||||||| |||||| || || || || ||||||||| || ||||| ||
Sbjct 80488 TCCCACCCTGTACAACGCAGGCACCCCCCAGCCCCAGATGTCGTCGTGTTTCCTCGTCAA 80429
Query 53347 GATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTC 53406
|||||||| ||||| ||||||||||||||||| || |||||| ||||| | ||| ||
Sbjct 80428 CATGAAGGACGACTCCATCGACGGCATCTACGACACTCTCAAGACTTGTGCTCTCATTTC 80369
Query 53407 CAAGTGGTCGGGTGGTATCGG--TATCCACTGCTCGAACGTCCGTGCGAACGGCACACCA 53464
||||| | || || || || | |||| | | | ||| |||| || | |||| |
Sbjct 80368 CAAGTCCGCTGGAGGCATTGGTCTGTCCA-TCCAC-AACATCCGAGCTACCGGCTCCTAC 80311
Query 53465 ATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTATGCTCCGCGTCTTCAACAAC 53524
||| || || ||||| | || | || |||||||| ||||| || || | |||||||
Sbjct 80310 ATCGCTGGAACCAACGGAACCTCCAACGGTATCGTGCCCATGCTGCGAGTGTACAACAAC 80251
Query 53525 ACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTC 53584
|| || || |||||| ||||||| || ||||| || | || ||||| |||||
Sbjct 80250 ACCGCTCGATACGTCGACCAGGGCGGCAACAAGCGACCCGGAGCCTTTGCCATGTACCTG 80191
Query 53585 GAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAA 53644
||||| ||||||| |||| | | ||||| ||||||||| ||| || ||| | ||
Sbjct 80190 GAGCCCTGGCACGACGACGTCTTCGAGTTCTGCGAGCTGCGAAAGAACCACGGTAAGGAG 80131
Query 53645 GAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAG 53704
||||| || ||| || ||||| ||||| ||||| || ||||| |||||| |
Sbjct 80130 GAGATTCGAGCCCGAGATCTGTTCCTGGCTCTCTGGATCCCCGACCTGTTCATGGAGCGA 80071
Query 53705 GTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGT 53764
|| ||| || ||| |||||| ||| |||||||| |||||||| |||||||| | |
Sbjct 80070 GTCGAGCAGAACGCCGAGTGGACCCTCATGTGCCCCAACGAGTGTCCCGGCCTTGATGAC 80011
Query 53765 GTCTACGGTGAGGAGTTTAACGAGATGTA 53793
|||||||| || ||||| || || ||||
Sbjct 80010 GTCTACGGCGACGAGTTCAAGCAGCTGTA 79982
Score = 158 bits (174), Expect = 1e-33
Identities = 304/445 (68%), Gaps = 5/445 (1%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|| ||||| ||||| ||||| || ||||| ||||| || || | ||||| | ||| |
Sbjct 79305 CGAAACTCGCTGCTGGTGGCCCCCATGCCCACCGCCTCCACCTCGCAGATTCTCGGCTTC 79246
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
|||||| |||||||| ||||| ||||||| ||| || || || || || |||
Sbjct 79245 AACGAGTGTTTCGAGCCCTACACCTCCAACATTTACTCTCGACGAGTGCTTGCTGGCGAG 79186
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACCCG 55663
|| || ||||| || ||||||||||| || || |||||| |
Sbjct 79185 TTCCAGATTGTCAACCCCTGGCTGCTCAAGGACCTGGTTGAGGTCGGACTGTGGAATGAG 79126
Query 55664 CAGATCAAGA-CGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGG---AGATTCC 55719
|| |||| | || || ||| || || ||||| ||||| | | || ||
Sbjct 79125 ACCATGAAGAACCGA-ATCGTGGCCGACAACGGATCCGTGCAGAACATCCCCAACATCCC 79067
Query 55720 TCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGA 55779
| | ||||||| | ||| ||| |||||||||||| | |||||| | | || ||
Sbjct 79066 CCAGGAGATCAAGGACCTGTACAAGACCGTGTGGGAGATTTCGCAGAAGCGAATCATCGA 79007
Query 55780 CATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGA 55839
||| |||||| || | | ||| ||||||||||||||||| |||||| ||| |
Sbjct 79006 GATGGCTGCTGACCGATCCCCCTTCATTGACCAGTCCCAGTCTCTCAACATCCACATCAA 78947
Query 55840 GAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAA 55899
| | || | ||| |||| | | ||| |||||||| ||||| ||||||||||| |||||
Sbjct 78946 GGACCCCACCATGGGCAAGCTCACCTCCATGCACTTCTACGGCTGGAAGAAGGGTCTCAA 78887
Query 55900 GACGGGTATGTACTATCTGCGGACC 55924
||| || |||||||| ||||| |||
Sbjct 78886 GACCGGCATGTACTACCTGCGAACC 78862
>seq5
Length=1963011
Score = 199 bits (220), Expect = 4e-46
Identities = 514/775 (66%), Gaps = 10/775 (1%)
Strand=Plus/Plus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
|||||||||| || |||| |||||||| |||||| | | || | || ||||||
Sbjct 1036948 TCATGCGCGTGGCTCTGGGGATCCACGGAGACGACATCGCCAAGGTGCTCGACACGTACA 1037007
Query 53253 ACTTAATGA-GC--CAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTA 53309
| || || | |||| | ||||| ||| | || ||||| |||||||| || |
Sbjct 1037008 CCGCTCTGTCGCTGCGCAAGTTC---ACGCATGCCTCTCCCACCCTCTTCAACGCAGGCA 1037064
Query 53310 CGAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACG 53369
| || ||| ||||| || || |||||||| ||| | ||||| |||||||
Sbjct 1037065 CCCCCCAGGGCCAGCTGTCGTCGTGTTTTCTGGTGGCCATGGCTGCGGACTCCATCGACG 1037124
Query 53370 GCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTA 53429
| |||||||| || |||||| |||||| || ||||| || | || || ||||||
Sbjct 1037125 GAATCTACGATACCCTCAAGACGTGTGCGCAAATCTCGAAAACCGCCGGCGGCATCGGTC 1037184
Query 53430 TCCACTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489
| || | ||| |||| || || ||| | || | ||| | | || ||
Sbjct 1037185 TGCATATCCACAACATCCGAGCCAAGGGCGCTATTATTACAGGGTCTCAAGGAAGATCCA 1037244
Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549
||| |||||||| |||||| | || ||||||||||| || ||||||| |||||||||
Sbjct 1037245 GTGGCATCGTGCCCATGCTCAGAGTGTTCAACAACACCGCGAGGTACGTGGACCAGGGTG 1037304
Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609
| ||||| || |||| |||||||| || ||||||||||||||||||||| | |
Sbjct 1037305 GGAACAAGCGTCCCGGCGCGTTTGCCATCTATCTGGAGCCGTGGCACGCCGACATTCTCG 1037364
Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668
| |||||| | ||||| || || || | |||||||| | ||| |||||||| |
Sbjct 1037365 ATTTTCTCAATCTGCGGAAAAACCATGGAGCCGAAGAGAACAGAGCCCGGGACCTGTTCT 1037424
Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728
|| || ||||| | || ||||| |||||| | ||| ||| || ||| ||||||
Sbjct 1037425 AC-GCATTGTGGGTGCCCGACCTGTTCATGAAGCGGGTCGAGCGGGGCGAAAAGTGGTCG 1037483
Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAG 53788
|| | || || || || || || || | | || | || |||||| | |
Sbjct 1037484 TTGTTCTGTCCCAAGAAGGCTCCGGGACTGGAAGACGTGTGGGGCCCCGAGTTTGAACAA 1037543
Query 53789 ATGTATCGGACGTACGCAGTTCA-GGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGT 53847
| ||| | ||||| || | ||||| ||||| || |||| || | ||| |
Sbjct 1037544 AAGTACGAGGAGTACG-AGAAAAGGGGCCTGTACAACGCCCAGATCAACGCCCAGGAGCT 1037602
Query 53848 ATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGA 53907
| | || || || | ||||||| | || || ||| || | |||| ||||||||
Sbjct 1037603 GTTCAAGGCGATTCTGACGAGCCAGATCGAAACCGGAGGCCCCTTCATGCTGTACAAGGA 1037662
Query 53908 TTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAAC 53962
||||| ||| ||||||| ||||| | || |||||||||| ||||
Sbjct 1037663 CAGCTGCAACGCAAAGTCCAACCAGCAGAACCTGGGAACCATCAAATCGTCCAAC 1037717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215733232200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |