Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028112.1
Length=178262
Score E
Sequences producing significant alignments: (Bits) Value
seq2 280 2e-70
seq7 187 3e-42
seq5 131 2e-25
seq1 87.8 2e-12
>seq2
Length=2949780
Score = 280 bits (310), Expect = 2e-70
Identities = 1133/1758 (64%), Gaps = 59/1758 (3%)
Strand=Plus/Plus
Query 80038 GTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAA 80097
|| ||||| ||||||||||| |||||||| ||||||||||||||||| | |||||| ||
Sbjct 78863 GTTCGCAGGTAGTACATGCCGGTCTTGAGACCCTTCTTCCAGCCGTAGAAGTGCATGGAG 78922
Query 80098 CTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAGATG 80157
||||||| | | ||||||| || ||| |||||| |||||||| ||||| |||
Sbjct 78923 GTGAGCTTGCCCATGGTGGGGTCCTTGATGTGGATGTTGAGAGACTGGGACTGGTCAATG 78982
Query 80158 AAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACTGTA 80217
|| | || || || ||||| || || ||| ||| || | ||| ||||| || ||
Sbjct 78983 AAGGGGGATCGGTCAGCAGCCATCTCGATGATTCGCTTCTGCGAAATCTCCCACACGGTC 79042
Query 80218 CGATACA---CCTTACGAAGCTCCTCTGGAATGTCCAGA---TTTTGCACACTGCCACCG 80271
|||| |||| | ||||| || |||| | || ||||| || |
Sbjct 79043 TTGTACAGGTCCTTG---ATCTCCTGGGGGATGTTGGGGATGTTCTGCACGGATCCGTTG 79099
Query 80272 TCCTTTACAATTTGATTTTTCAAT-TCAGACGTCCAGACACCAAGCTTGTGCAGATCTTT 80330
|| || ||| | || |||| || | |||| | || | || ||| || ||
Sbjct 79100 TCGGCCACGATTCGGTTCTTCATGGTCTCAT-TCCACAGTCCGACCTCAACCAGGTCCTT 79158
Query 80331 CACAAG---GTGCTTGTTAATCATGACAAACTCTCCCGCGAGGGTGCGACGCAGA-TACA 80386
| || | | ||| |||| || |||| || || || || || ||| || |
Sbjct 79159 GAGCAGCCAGGGGTTGACAATCTGGA---ACTCGCCAGCAAGCACTCGTCG-AGAGTAAA 79214
Query 80387 GGTTTGTAGTGTAAGGCTCAAATGCCTCGTTGTTTCCGAGGATCTGAGCCGTGCTCGCCG 80446
||| | ||||| ||||| || ||||||| ||||| ||||| | ||| || |
Sbjct 79215 TGTTGGAGGTGTAGGGCTCGAAACACTCGTTGAAGCCGAGAATCTGCGAGGTGGAGGCGG 79274
Query 80447 TCGGCATCGGGCCGACCAACAGTGAATTCCGCAGGCCGTGCTTCTTGATAT---CCTCGC 80503
| ||||| ||| | |||| ||| || || |||| ||| |||| |||| | ||| |
Sbjct 79275 TGGGCATGGGGGCCACCAGCAGCGAGTTTCGCATTCCGGTCTTCATGATCTTGGCCTTGA 79334
Query 80504 GCAAATCTGACCAAAAATCAA--CCCCAACGCTGTGACC--CCACATGTCGTGCTGCAAG 80559
| ||| | || | || | | | | || || ||||| || ||||| |
Sbjct 79335 G---ATC-GTCCCACTCCCAGAGCTCGGAGGGAGTCACGTTCCACAGATCAAACTGCAGG 79390
Query 80560 ATGCCCTCCGACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGC 80619
|||| || || ||||| ||| ||| |||||||| | ||| ||| ||||| |
Sbjct 79391 TCACCCTTGGAGGCAGGAGAGCCCTGGAAGGTCTCGTAGGCGCCGTCCTCAAGGGCCATC 79450
Query 80620 TCACACGACTCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCA-CACC 80678
|| | || || || ||| |||| || ||| ||| |||| |||| | | |
Sbjct 79451 TCGTAGGAGGCCTCAACGGCTCCGTGGTAGATGGTCTCGAAGATCTGGATGTTGAGCTTC 79510
Query 80679 GCGCGCCTG-TGGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCT 80737
| |||| | || | || || | | | | |||||| ||||||||| ||||
Sbjct 79511 TTG-GCCTCCTCGGAC-TCAAAGGGAAGTCGGAGGGCCATGAAAGTGTCAGCCAGACCCT 79568
Query 80738 GAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGT 80797
| || || | || || || ||||| ||| |||| || || |||||| || | ||||
Sbjct 79569 GGACACCCAGAGCAATGGGTCGGTGTCGCATGTTGGACTTCTTGGCCTCGGGGACGGGGT 79628
Query 80798 AAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAA 80857
| |||| ||||||| | ||| ||||| || || ||| | || ||| || |
Sbjct 79629 AGTAGTTTCGGTCGATGATGGCGTTGAGGTTTCGCACAATCACCTTGGCAATATCGTGCA 79688
Query 80858 GTTTCTGAAAGTCGAA-------TTGGT-TCCCCT----TCACAAATGCCGGAAGGCTCA 80905
| |||| |||||| | ||||| || || | ||||| | || || |
Sbjct 79689 GCTTCTTGAAGTCGTAGAACGAGTTGGTCTCGTCTCGAGTGACAAAAGTAGGCAGCGCAA 79748
Query 80906 GGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGC 80965
||| ||||| ||||| ||||||||||| |||| | | ||||||| || || ||
Sbjct 79749 TGGAGGCCAGGTTGCAGACGGCCACCTCGTCAGGAGACGAGTACTCGACAATCTCGCAGC 79808
Query 80966 ACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGT 81025
||| || || ||||| || ||||||||||| |||||||| ||||| |||||| | ||
Sbjct 79809 ACAGGTTGGACGACTTGATAGTACCCAGGTTCTTCTGGTTGGACTTTCGGTTGCAGGAGT 79868
Query 81026 CCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAA 81085
|||||||| |||| | ||| | |||| |||| ||| | | || ||| || ||| |
Sbjct 79869 CCTTGTAGAGCATGAAGGGGTTGCCGGACTCGGTCTGACAGTCCAGAATGTGGTACCACA 79928
Query 81086 TCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCACATACTTGGCGTA-AGCT 81144
|| | || || ||| | ||| || | | |||| |||| ||||
Sbjct 79929 GCTTCTGGGCGGGGATGGTTCGTCGGCCTCGGCCCTCCTTCTCGTACTGCTCGTACAGCT 79988
Query 81145 TCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGG 81204
| | ||||| | | |||| | ||| ||| | || |||||||| |||||||| |||
Sbjct 79989 GCTT-GAACTCGTCGCCGTAGACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGG 80047
Query 81205 TGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTG 81264
||| |||| || | ||| || || |||||| ||| ||||||||||| || |
Sbjct 80048 GTCCACTCGGCGTTCTGCTCGACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGG 80107
Query 81265 AACAGGTCGCGGCAGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGAAAGTCC 81324
||||| || ||| || |||||| | ||| ||||| |||| |||| || ||
Sbjct 80108 AACAGATCTCGGGCTCGAATCTCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCG 80167
Query 81325 ATGATGTCCGCATGCCATGGCTCCAGATACACGGC----GATC--GACCCCTTGCGACGG 81378
| || ||| | ||||| |||||||| |||| ||| | || | | |||| |
Sbjct 80168 AAGACGTCGTCGTGCCAGGGCTCCAGGTACATGGCAAAGGCTCCGGGTCGCTTG---TTG 80224
Query 81379 CCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCA 81438
|| ||||||| |||||| || || || ||| | || |||| ||| || | ||||||
Sbjct 80225 CCGCCCTGGTCGACGTATCGAGCGGTGTTGTTGTACACTCGCAGCATGGGCACGATACCG 80284
Query 81439 TCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGATTGAA 81498
| || ||||| || || |||| || || | || || | ||| ||| ||
Sbjct 80285 TTGGAGGTTCCGTTGGTTCCAGCGATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGAC 80344
Query 81499 AGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATT 81558
||||| ||||| || | |||| ||||| ||||||| || | || || || ||
Sbjct 80345 AGACCAATGCCTCCAGCGGACTTGGAAATGAGAGCACAAGTCTTGAGAGTGTCGTAGATG 80404
Query 81559 CCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCT-TTT 81617
|| |||||| || | ||||||| | | |||||| |||||||| |||||
Sbjct 80405 CCGTCGATGGAGTCGTCCTTCATGTTGACGAGGAAACACGACGACATCTG-GGGCTGGGG 80463
Query 81618 TGAGCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTC 81677
| ||| || ||| |||| || || | || || |||| || | ||||| ||
Sbjct 80464 GGTGCCTGCGTTGTACAGGGTGGGAGAAGCATGGGTGAAGTACTTCTGAGACATGTAGTT 80523
Query 81678 ATAGGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAA 81737
||||| || | | || | ||| ||||| ||||| ||||||| || || ||||| |
Sbjct 80524 GTAGGTCTCGATAGCTCGGGCAATGTCGTCGCCGTGGATACCGACAGACACTCGCATGAT 80583
Query 81738 CATGTACTGGGGCGTCTC 81755
||| | ||| || ||||
Sbjct 80584 CATCTGCTGAGGTCTCTC 80601
Score = 168 bits (186), Expect = 8e-37
Identities = 173/226 (77%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 27407 TGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTG 27466
||||||||||||||||||| ||||| |||||||| || || || ||||| ||||| |
Sbjct 2456518 TGCAAATCTTTGTCAAGACCCTTACTGGCAAGACCATCACCCTCGAGGTGGAGTCTTCCG 2456577
Query 27467 ATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGC 27526
| | ||||| || | ||| | || || |||||||||||||| ||||| || |||||||
Sbjct 2456578 ACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGC 2456637
Query 27527 AGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATG 27586
|||| || || || || || ||||| |||||||| | || || || | ||||| ||
Sbjct 2456638 AGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACTCTTTCTGACTACAACA 2456697
Query 27587 TCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| || || || ||||||| || || ||
Sbjct 2456698 TCCAGAAGGAGTCCACTCTGCACCTGGTTCTGCGTCTCCGAGGAGG 2456743
>seq7
Length=1109975
Score = 187 bits (206), Expect = 3e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464
|||||| || ||||||||||| |||||||| |||||||| || |||||||| |||||
Sbjct 1062555 AATGCAGATTTTTGTCAAGACCCTTACCGGTAAGACTATCACCCTTGAGGTGGAGTCTTC 1062614
Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524
|| | ||| | || | ||| | || || |||||||||||||||||||| || |||||
Sbjct 1062615 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 1062674
Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584
|||||| || || || || |||||||| |||||||| | || ||||| | ||||| ||
Sbjct 1062675 GCAGCGACTTATCTTCGCCGGTAAGCAGCTCGAGGACGGCCGAACCCTTTCTGACTACAA 1062734
Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632
|||| ||||| |||||||| ||||| || |||| || || |||||
Sbjct 1062735 CATCCAGAAGGAGTCCACTCTCCATCTCGTTCTGCGACTCCGAGGTGG 1062782
>seq5
Length=1963011
Score = 131 bits (144), Expect = 2e-25
Identities = 260/387 (67%), Gaps = 30/387 (8%)
Strand=Plus/Minus
Query 80703 CAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTG 80762
|| || || | |||| |||||||| ||||| ||||| ||||| | ||| ||||| || ||
Sbjct 1038008 CATGCGCAGCTTCATAAACACGTCTGCCAGACCCTGCACGCCCACGGCAATCGGACGATG 1037949
Query 80763 GCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTT 80822
||||||||| || || |||||| | ||||| |||| ||||||| || |||
Sbjct 1037948 GCGCTTGTTGGACGTTTCTGCCTCCTTGACGGGGTAGCAGTTGGCCTCGATGATGCTGTT 1037889
Query 80823 CAGGTTGCGTGTAACAACCCGTGTAACA---TCATGAAGTTTCTGAAAGTCGAAT----- 80874
||||| || || | || | || | ||| |||| ||||| | |
Sbjct 1037888 GAGGTTTCGCGTCATGT---GTTTGACGGTCTTATGCAGTTCTCCAAAGTTGTAGGACCC 1037832
Query 80875 -----TGGTT--------CCCCTTCA------CAAATGCCGGAAGGCTCAGGGACGCCAG 80915
||||| | |||| | |||| |||| || || |||||||||
Sbjct 1037831 TGCGGTGGTTTTGTCGCTCTCCTTGAGCTGGACAAACTCCGGCAGAGCCACGGACGCCAG 1037772
Query 80916 ATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGA 80975
|||||||| ||||||||||| | | ||| ||||||||||||||||| || ||
Sbjct 1037771 GTTGCACACCGCCACCTCTTCCGGCGACGAGTACTGGACGATTTCCGTGCACAGGTTGGA 1037712
Query 80976 AGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCA 81035
|| || || || |||||||| | |||||| ||||| |||||||| |||||||||
Sbjct 1037711 CGATTTGATGGTTCCCAGGTTCTGCTGGTTGGACTTTGCGTTGCAGCTGTCCTTGTACAG 1037652
Query 81036 CATGTACGGGGTACCGGTCTCGACCTG 81062
|||| | ||| ||||| |||| |||
Sbjct 1037651 CATGAAGGGGCCTCCGGTTTCGATCTG 1037625
>seq1
Length=4810746
Score = 87.8 bits (96), Expect = 2e-12
Identities = 62/71 (87%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543
||| | || ||||||||||||||||||||||| || ||||||||||| || ||||| |||
Sbjct 3590322 AAGTCCAAGATTCAGGACAAGGAGGGAATTCCCCCGGACCAGCAGCGACTCATTTTCGCT 3590263
Query 27544 GGTAAGCAACT 27554
|||||||| ||
Sbjct 3590262 GGTAAGCAGCT 3590252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570310121973680
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