Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028461.1
Length=127011
Score E
Sequences producing significant alignments: (Bits) Value
seq6 168 5e-37
seq10 87.8 1e-12
>seq6
Length=1650383
Score = 168 bits (186), Expect = 5e-37
Identities = 403/604 (67%), Gaps = 19/604 (3%)
Strand=Plus/Minus
Query 29872 CTTCAGCGGTTCCACGTTATCCAGGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTC 29931
|||||| | ||||||| ||| ||| |||||||||||||||| |||||| | |||
Sbjct 1315132 CTTCAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTC 1315073
Query 29932 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29991
|| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1315072 GCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAAT 1315013
Query 29992 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT- 30050
||| ||||| || || || |||| || | |||| |||||| ||||| ||||| |||
Sbjct 1315012 GTTGAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCG 1314953
Query 30051 ------CTCCGTCG-CT-------CACGTAAAACTGACACATGGCGTGGCACGGAGGAAG 30096
||||| || ||| || ||||| || | ||| || ||||| ||
Sbjct 1314952 GCCCCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAG 1314893
Query 30097 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 30156
|||||| | || || |||||||| || ||| ||||| || | ||| | ||
Sbjct 1314892 AGCCATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGG 1314833
Query 30157 GTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGT 30215
|||| || ||| ||| || | | | | ||||||||||| ||| || |||||
Sbjct 1314832 GTTGGTCTTGA-GAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGT 1314774
Query 30216 CTGCC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGT 30274
||| | || ||| ||||||| ||||| ||||| | ||| ||||| || ||||| |||
Sbjct 1314773 CTGTGTCGCA-GTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGT 1314715
Query 30275 CCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCG 30334
|||||||||||||| ||||| | | || ||| |||| ||| || |||| |||
Sbjct 1314714 CCCAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCG 1314655
Query 30335 TTGGCGTCCCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTG 30394
|| |||||||||| | | ||| || |||| ||| || || | ||
Sbjct 1314654 TTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCC 1314595
Query 30395 ACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGG 30454
|| |||||||||||||| |||| ||| | | ||||||| ||| || ||||| ||
Sbjct 1314594 ACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGA 1314535
Query 30455 GGAA 30458
||||
Sbjct 1314534 GGAA 1314531
>seq10
Length=888286
Score = 87.8 bits (96), Expect = 1e-12
Identities = 135/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Minus
Query 52729 TCGTCAAGGTGAGGCTGAGGGCCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCGTCGT 52788
||||||||||| | || | || | | | ||| |||| || ||||||||||| |||
Sbjct 502258 TCGTCAAGGTGCGAATGCGAACCACAAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 502199
Query 52789 -TCACGGCGCAAAAGGGGACG--TGCGGAGCCGTCCTGACCCAGGAGGACATGCCCTT-- 52843
|||||| || ||||| || || | | | | | ||| | ||||||||||| ||
Sbjct 502198 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGACATGCCGTTTT 502142
Query 52844 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 52903
|| | || || || |||||||| |||||||||||||||||||| ||||||| | ||
Sbjct 502141 CGGCC--GAGGGTGTCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 502084
Query 52904 GACCGT 52909
||||||
Sbjct 502083 GACCGT 502078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406310206875588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |