Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq7 125 4e-24
seq2 100 2e-16
>seq7
Length=1109975
Score = 125 bits (138), Expect = 4e-24
Identities = 166/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || |||| || | |||||||||| |||||| || ||||| || || |||
Sbjct 1062782 CCACCTCGGAGTCGCAGAACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 1062723
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || |||||||| || || | ||||| |||||||| ||
Sbjct 1062722 AGGGTTCGGCCGTCCTCGAGCTGCTTACCGGCGAAGATAAGTCGCTGCTGGTCCGGGGGA 1062663
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| || | || ||| | || ||||| ||||||
Sbjct 1062662 ATTCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCAC 1062604
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || |||||||| | || || ||||||||||||||
Sbjct 1062603 CTCAAGGGTGATAGTCTTACCGGTAAGGGTCTTGACAAAAATCTGCAT 1062556
>seq2
Length=2949780
Score = 100 bits (110), Expect = 2e-16
Identities = 160/227 (70%), Gaps = 2/227 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||||| |||| || |||||| |||||| || ||||| || || |||
Sbjct 2456743 CCTCCTCGGAGACGCAGAACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAA 2456684
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| ||||| |||| || || || || ||||| || || | ||||| |||||||| ||
Sbjct 2456683 AGAGTTCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCCGGGGGA 2456624
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | ||| ||||| ||||||
Sbjct 2456623 ATGCCCTCCTTGTCCTGGATC-TTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 2456565
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCA 34705
|| | ||| || || || || || | || || ||||| || ||||
Sbjct 2456564 CTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACAAAGATTTGCA 2456518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729450405087
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |