Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 2e-24
seq10 84.2 2e-11
>seq6
Length=1650383
Score = 127 bits (140), Expect = 2e-24
Identities = 387/604 (64%), Gaps = 23/604 (4%)
Strand=Plus/Minus
Query 29646 TCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTC 29705
|||| | ||||||||||| ||| |||||||| ||||||| ||||||| | ||| |
Sbjct 1315130 TCAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTCGC 1315071
Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765
| || || |||| || || || ||||| || | |||| ||| ||| ||||
Sbjct 1315070 CACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAATGT 1315011
Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAG----- 29820
| ||||| || || || |||| || | |||| |||||| ||||||||||| ||
Sbjct 1315010 TGAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCGGC 1314951
Query 29821 --CTCTCC--------GTCGCTCACGTAAAACTGAC---ACATGGCATGGCACGGAGGAA 29867
| |||| || ||| || ||||| | ||||| || || ||||| |
Sbjct 1314950 CCCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATG---TGACAGGGAGGCA 1314894
Query 29868 GGGCCATGAGACCCAAGTCTTTGGGGTTCCAGGCACACACGATGATGCGCCTGTCTTCTG 29927
| ||||| || || |||||||| ||| ||| ||||| || | ||| | |
Sbjct 1314893 GAGCCATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGG 1314834
Query 29928 GGTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAG 29986
||||| || ||| ||| || | | | | ||||||||||| ||| || ||||
Sbjct 1314833 GGTTGGTCTTGA-GAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAG 1314775
Query 29987 TCTGNNNNNNNNNNNNNNNNNNNNNNNNCGAAATGCCTCCACTGGAACCCGTACACCGGT 30046
|||| | ||||| | ||| ||||| || ||||| |||
Sbjct 1314774 TCTGTGTCGCAGTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGT 1314715
Query 30047 CCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCG 30106
|||||||||||||| ||||| | | || ||| |||| ||| || |||| |||
Sbjct 1314714 CCCAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCG 1314655
Query 30107 TTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG 30166
|| |||||||||| | | ||| ||| |||| ||| || || | ||
Sbjct 1314654 TTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCC 1314595
Query 30167 ACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGG 30226
|| |||||||||||||| |||| ||| | | ||||||| ||| || ||||| ||
Sbjct 1314594 ACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGA 1314535
Query 30227 GGAA 30230
||||
Sbjct 1314534 GGAA 1314531
>seq10
Length=888286
Score = 84.2 bits (92), Expect = 2e-11
Identities = 134/186 (72%), Gaps = 10/186 (5%)
Strand=Plus/Minus
Query 53493 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGCGACAAGTTTGCATC-C 53551
||||||||||| | || | ||| | | | ||| |||| || ||||||||||| || |
Sbjct 502258 TCGTCAAGGTGCGAATGCGAACCACAAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 502199
Query 53552 TTCACGGCGCAAAAGGGGACATGCGGAGCGGTCCTGACT--CAGGAGGACATGCCCTT-- 53607
|||||| || ||||| || || | | || || || ||||||||||| ||
Sbjct 502198 GTCACGGA-CAGAAGGGTACCATTGGTGTGA--CTTACAGACACGAGGACATGCCGTTTT 502142
Query 53608 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 53667
|| | || || || |||||||| |||||||||||||||||||| ||||||| | ||
Sbjct 502141 CGGCC--GAGGGTGTCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 502084
Query 53668 GACGGT 53673
||| ||
Sbjct 502083 GACCGT 502078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163006945554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |