Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq6 183 2e-41
seq10 93.3 3e-14
>seq6
Length=1650383
Score = 183 bits (202), Expect = 2e-41
Identities = 406/604 (67%), Gaps = 19/604 (3%)
Strand=Plus/Minus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
|||||| | |||||||| ||| ||| |||||||||||||||| ||||||| | |||
Sbjct 1315132 CTTCAGGGCATCCACGTGGTCCTTGTACACGTGAGCGTCTCCCATAGTGTGGATGAGCTC 1315073
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
|| || || |||| || || || ||||| || | |||| ||| ||| ||
Sbjct 1315072 GCCACAGTCCAGATCGGTCACCTGGGCAATCATTCGAGTCAACAGAGCGTAAGAGGCAAT 1315013
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT- 27316
||| ||||| || || || |||| || | |||| |||||| ||||| ||||| |||
Sbjct 1315012 GTTGAAGGGGACACCCAGACCCAGATCACAGGACCGCTGGTACAGCTGGCACGACAGCCG 1314953
Query 27317 ------CTCCA---TCGCTTACG-----TAAAACTGACATATGGCGTGGCACGGAGGAAG 27362
|||| || |||| || ||||| || | ||| || ||||| ||
Sbjct 1314952 GCCCCGCTCCGAGTTCTTGTACGACACATAGAACTGGCAGAACATGTGACAGGGAGGCAG 1314893
Query 27363 AGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGG 27422
|||||| | || || |||||||| || ||| ||||| || | ||| | ||
Sbjct 1314892 AGCCATCTTGGACAGATCGGCAGGGTTCCATGCAGACAGAATGATTCGTCGGTCCTGGGG 1314833
Query 27423 GTTGTTCCTGATGAG-GTCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGT 27481
|||| || ||| ||| || | | | | ||||||||||| ||| || |||||
Sbjct 1314832 GTTGGTCTTGA-GAGTGTGAATCACCTGCTTGAGCTGATCCACGCCCTGGCCACTGTAGT 1314774
Query 27482 CTACC-CTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGT 27540
|| | || ||| ||||||| ||||| ||||| | ||||||||| || ||||| |||
Sbjct 1314773 CTGTGTCGCA-GTCTTTGTACTCGGCTCCAAAATGACGCCATTGGAAGCCATACACGGGT 1314715
Query 27541 CCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCG 27600
|||||||||||||| ||||| | | || ||| |||| ||| || |||| |||
Sbjct 1314714 CCCAGGTCTCCCTCACGTCTGTGTCCCAGTCCAGCCTTCTCCAGAAACTCCTTGGATCCG 1314655
Query 27601 TTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTG 27660
|| |||||||||| | | ||| ||| |||| ||| || || | ||
Sbjct 1314654 TTTCCGTCCCAGATGTGAATGTTCTTTTCGCTCAGCTTCTTGCCGTCGGTACATCCGGCC 1314595
Query 27661 ACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGG 27720
|| |||||||||||||| |||| ||| | | ||||||| ||| || ||||| ||
Sbjct 1314594 ACAAACCACAGCAGCTCTTCCAAAACGCCTCGGTAGAAGACCCGCTTTGTGGTGAGCAGA 1314535
Query 27721 GGAA 27724
||||
Sbjct 1314534 GGAA 1314531
>seq10
Length=888286
Score = 93.3 bits (102), Expect = 3e-14
Identities = 136/186 (73%), Gaps = 10/186 (5%)
Strand=Plus/Minus
Query 48509 TCGTCAAGGTGAGGCTGAGGACCCCCAGGCACCCAGAGATGGGTGACAAGTTTGCGTC-C 48567
||||||||||| | || | ||| | | | ||| |||| || ||||||||||| || |
Sbjct 502258 TCGTCAAGGTGCGAATGCGAACCACAAAGATCCCCCAGATTGGAGACAAGTTTGCCTCGC 502199
Query 48568 TTCACGGCGCAAAAGGGGACATGTGGAGC--CGTCCTGACCCAGGAGGACATGCCCTT-- 48623
|||||| || ||||| || ||| | | | | ||| | ||||||||||| ||
Sbjct 502198 GTCACGGA-CAGAAGGGTACCATTGGTGTGACTTACAGACAC--GAGGACATGCCGTTTT 502142
Query 48624 CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCACGCCTTTCCCTCCAGGAT 48683
|| | || || || |||||||| |||||||||||||||||||| ||||||| | ||
Sbjct 502141 CGGCC--GAGGGTGTCGTGCCCGATATCATCATCAACCCCCACGCCATTCCCTCGCGTAT 502084
Query 48684 GACCGT 48689
||||||
Sbjct 502083 GACCGT 502078
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369507024368609
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |