Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Yarrowia_20sp._20JCM_2030696_20[genbank_20GCA_5F001600535.1_202016-
03-01] 39 sequences; 21,750,525 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq2 179 5e-40
seq3 111 2e-19
>seq2
Length=2949780
Score = 179 bits (198), Expect = 5e-40
Identities = 454/686 (66%), Gaps = 6/686 (1%)
Strand=Plus/Plus
Query 77943 ACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTA 78002
|| ||||| | || || || || || |||||||| | | ||| || | | | ||
Sbjct 80009 ACGTCATCAAGGCCGGGACACTCGTTGGGGCACATGAGGGTCCACTCGGCGTTCTGCTCG 80068
Query 78003 ACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGT 78062
||||| | ||| || || || || ||||| ||||| | || |||||||||| || |
Sbjct 80069 ACTCGCTCCATGAACAGGTCGGGGATCCAGAGAGCCAGGAACAGATCTCGGGCTCGAATC 80128
Query 78063 TCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 78122
|| || || || |||||| || ||| ||||| | | || ||||| ||
Sbjct 80129 TCCTCCTTACCGTGGTTCTTTCGCAGCTCGCAGAACTCGAAGACGTCGTCGTGCCAGGGC 80188
Query 78123 TCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCG 78182
|| || || || || | |||| ||||| || || || ||||| || | |||| |||
Sbjct 80189 TCCAGGTACATGGCAAAGGCTCCGGGTCGCTTGTTGCCGCCCTGGTCGACGTATCGAGCG 80248
Query 78183 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAA 78242
||||| || || |||| || ||| || | |||||||| || ||||| || |||||||
Sbjct 80249 GTGTTGTTGTACACTCGCAGCATGGGCACGATACCGTTGGAGGTTCCGTTGGTTCCAGCG 80308
Query 78243 ATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTA 78302
|| || || | || || || || ||||| | || || ||||| || |||
Sbjct 80309 ATGTAGGAGCCGGTAGCTCGGATGTTGTGGATGGACAGACCAATGCCTCCAGCGGACTTG 80368
Query 78303 GATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATG 78362
|| || ||||| ||| || | || |||||||| || || || ||| ||| |||||
Sbjct 80369 GAAATGAGAGCACAAGTCTTGAGAGTGTCGTAGATGCCGTCGATGGAGTCGTCCTTCATG 80428
Query 78363 TTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGA 78422
|| | || ||||| ||||| || | || || ||||| || | | || |||
Sbjct 80429 TTGACGAGGAAACACGACGACATCTGGGGCTGGGGGGTGCCTGCGTTGTACAGGGTGGGA 80488
Query 78423 GATGCATGCGTAAACCATTTTTCAGAAA-GTAGATTGTATGTTTCAATAGCTGATTCTAT 78481
|| ||||| || || | || | ||| | |||| ||||| || || |||||| | ||
Sbjct 80489 GAAGCATGGGTGAAGTACTTCTGAGACATGTAG-TTGTAGGTCTCGATAGCTCGGGCAAT 80547
Query 78482 GTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCA--ACC 78539
||| || || || || | || ||||| | ||| ||||||||||| ||| | |
Sbjct 80548 GTCGTCGCCGTGGATACCGACAGACACTCGCATGATCATCTGCTGAGGTCTCTCAGCAAC 80607
Query 78540 GTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTG 78599
| | | || | | || || ||||| | |||| ||| || || ||||| ||||||
Sbjct 80608 GGC--ACCGTTGACTCGCAGCAGGTATGCTCGCTCCAGAGTCTTGAAGCCAAAGTAGTTG 80665
Query 78600 TATGAAAAGTCTCTCTCGTAAATAAT 78625
|| | |||||||| ||||| | |||
Sbjct 80666 TAGGTGAAGTCTCTGTCGTAGAGAAT 80691
>seq3
Length=2682169
Score = 111 bits (122), Expect = 2e-19
Identities = 383/596 (64%), Gaps = 6/596 (1%)
Strand=Plus/Plus
Query 48132 AACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAA 48191
|||| | ||| ||||| || || ||||| || |||| || | ||||| ||
Sbjct 1915131 AACAGCAGACAGGCAAAGTCCGTGTGCAGACCCTCGTCTCGGGAGATGAGCTCGTTGGAG 1915190
Query 48192 AATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCA 48251
|| || || |||||||| || || || || |||||||| || || | || || || ||
Sbjct 1915191 AAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAACGAGCCG 1915250
Query 48252 GAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGGCTTCG 48311
|| || || ||||| || ||||| ||||| || | |||| ||| || | ||| |||
Sbjct 1915251 GAGAAAAAGATGCCCTCCACGGCGGCAAAGGCAATGAGTCGCTCGCCAAAGGTGGACTCG 1915310
Query 48312 TTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGCATTGTTTCT 48368
| || |||||| | ||||| || ||||||||||| | || || || || ||
Sbjct 1915311 TCGTCGGAGATCCACTTGAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGAATGGTCTCG 1915370
Query 48369 ATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGTAAGTATCTATTAAAAGA 48428
|| || || || || || || || ||| || || | ||| || || || | ||
Sbjct 1915371 ATGGCGTTGAACAGGTAGGTTCGCTCCTTGGGGTCCTTGATGTATGTGTCGATCAGCAGC 1915430
Query 48429 CTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAACATCTCGCT 48488
|| |||| ||||| || || || || ||||| || ||||| || || | ||
Sbjct 1915431 GAGTAGGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCACTTGGCC 1915490
Query 48489 TCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTATTCCATCA 48548
|| | | ||| ||||| |||| || || ||| ||||| || || || || ||
Sbjct 1915491 TCGGGGGCCTGCACCTCGCCGGAAAACCGCTCCACCAGGTTCTCGTTGACGATGCCGTCC 1915550
Query 48549 CTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATA---TTTTTCGTTGGAAGTCAGT 48605
|| ||||| || || | || || || || | | |||||| | |
Sbjct 1915551 GAGGCGGCAAAGAAGGCCAGCACGTGGGAGATGAAGAACCGCTCGTCGTTGTTGAGCCGG 1915610
Query 48606 TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAATGATGCC 48665
|| | |||||| || || || | ||| | ||| || || ||||| || || |||
Sbjct 1915611 TTCTCCCAGTCGCCCATGTCCTTGCCGAGATCGATTTCCTCGGCCGTCCAGAACGACGCC 1915670
Query 48666 TCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTGGGAAAATAACAAA 48721
|| || || || ||||| | ||| || || ||| ||||| ||||| | |||||
Sbjct 1915671 TCGGCCTTCTTGTACATCTGCCAGATCTCGTGGTACTGGATGGGGAAGAGCACAAA 1915726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668461348960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |